Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178415.1_202017-04- 21] 924 sequences; 11,574,455 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq11 183 4e-41 >seq11 Length=170946 Score = 183 bits (202), Expect = 4e-41 Identities = 829/1301 (64%), Gaps = 36/1301 (3%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 62722 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 62781 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CGTTC 116021 || || ||||| ||||||||| | | || | | ||| | | | || | || Sbjct 62782 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 62841 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||| |||||| || | || | | | ||||||||||||||||| || Sbjct 62842 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 62900 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 62901 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 62960 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 62961 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 63020 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| || || |||||||| | | ||| ||| || || || ||||||||||| Sbjct 63021 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 63080 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 63081 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 63140 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 63141 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 63200 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 116426 |||| | | | | || ||||| |||| ||| || || || Sbjct 63201 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 63257 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 63258 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 63317 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 63318 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 63377 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 63378 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 63437 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||||| | |||| | ||| || | || || || | |||||| || Sbjct 63438 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 63494 Query 116667 GTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 116723 || || ||||||||||| ||||| ||| | || | | || || | || || ||| Sbjct 63495 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 63551 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 63552 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 63611 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 63612 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 63671 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 116899 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 63672 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 63731 Query 116900 TGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | | |||| |||||| ||||| | || || || || || |||| ||| |||| Sbjct 63732 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 63790 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCG 117018 | | ||| | ||| || ||||| || ||| || || ||| | | | | Sbjct 63791 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTA 63849 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| || | ||||||||| || || || || || || || ||| | | || Sbjct 63850 TGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTG 63909 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||| Sbjct 63910 TCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGA 63969 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 || |||| ||||| || ||||| | ||||| | ||||| Sbjct 63970 GGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 64010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613500113991840