Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178415.1_202017-04- 21] 924 sequences; 11,574,455 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq2 105 8e-18 >seq2 Length=675329 Score = 105 bits (116), Expect = 8e-18 Identities = 177/251 (71%), Gaps = 15/251 (6%) Strand=Plus/Plus Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038 |||||||| | | || ||||| || ||||||||||| ||||||||||||| ||| Sbjct 195723 CCAGAAATGTTGGGAGGTAGAGTGAAAACTTTACATCCTGCCGTTCATGGTGGTATCCTT 195782 Query 151039 GCACAACGAGGTAATTC--TAGTCATGATTTAGATCTTAAGGTAAATCGTATTGAAC--- 151093 || ||| | || ||| |||| ||| | |||| | | | |||||| Sbjct 195783 GCT-----AGGGACATCGATAGCGATGAGAAAGACTTGAAGGAACAGCACATTGAAAAAG 195837 Query 151094 -CGATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGT 151152 ||||| || | ||| ||||| |||||| ||||| ||||||||||||||||| ||| Sbjct 195838 TCGATT-ATGTCGTT--TGTAA-CCTATACCCATTCAAAGAAACTGTTGCTAAGGTGGGT 195893 Query 151153 GTAACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCA 151212 || ||| || ||||||| | || | ||||| ||||||||| || | | ||||| || Sbjct 195894 GTGACTATTCCAGAAGCCGTAGAAGAAATTGATATTGGTGGTGTTACTCTATTAAGAGCA 195953 Query 151213 GCAGCAAAGAA 151223 || || ||||| Sbjct 195954 GCTGCTAAGAA 195964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582841268105600