Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178415.1_202017-04- 21] 924 sequences; 11,574,455 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq781 178 1e-39 seq67 136 5e-27 seq24 125 8e-24 seq11 125 8e-24 seq910 91.5 2e-13 >seq781 Length=1603 Score = 178 bits (196), Expect = 1e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| || || || |||||||| || || |||||||| || | Sbjct 353 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 294 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | |||||||| |||||||| || ||||||||||||||| Sbjct 293 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 234 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| ||||||||||| || |||| | | || || | ||||| ||| Sbjct 233 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 174 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| ||||||||||| || |||||| Sbjct 173 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTG 141 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || || || || |||||||| || || |||||||| || Sbjct 581 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 522 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | || ||||||||| || || || || || ||||| || || Sbjct 521 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 462 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||||||||||||||| || |||| | | ||| | | ||||| || Sbjct 461 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 402 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| |||||||| | || ||| | || | ||||| Sbjct 401 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGG 355 Score = 123 bits (136), Expect = 3e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| || || || |||||||| || || |||||||| || | Sbjct 809 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 750 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | |||||||| |||||||| || ||||||||||| || Sbjct 749 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 690 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| ||||||||||| || || | | | || || | || ||||| Sbjct 689 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 630 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | || || || || || | ||| | || ||| Sbjct 629 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTG 597 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||| || || || ||| | |||||||| || Sbjct 1037 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 978 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | ||||| ||||||||||| || || |||||||| || Sbjct 977 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 918 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| |||||||| || || || | | | ||| | | ||||| || Sbjct 917 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 858 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||||||||| |||||||| Sbjct 857 ATCCAAAAGGAATCTACTCTTCA 835 >seq67 Length=24591 Score = 136 bits (150), Expect = 5e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| || || ||||| || | Sbjct 8488 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 8547 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || || || |||||||| || ||||| || ||||| Sbjct 8548 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 8607 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | | || | | ||||| || Sbjct 8608 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 8667 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| ||||| || | |||||| Sbjct 8668 ATCCAAAAGGAATCTACTCTACACTTGGTCTTG 8700 >seq24 Length=89788 Score = 125 bits (138), Expect = 8e-24 Identities = 338/512 (66%), Gaps = 15/512 (3%) Strand=Plus/Minus Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290 ||||||||| ||||||||||| || || | ||||| || | ||| || || || Sbjct 60660 TTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCA-CGAATTTCTTC 60602 Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350 | ||| || | | | |||| |||||| | ||| || |||||||||||||||| Sbjct 60601 CTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCTCCAA 60542 Query 81351 ATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGT 81404 | | ||||| | || |||| || ||||||||| || ||||||||||| Sbjct 60541 GAAAAGGGCGAAAGCACCAGGTCTCTTGTTAC---CACCCTGGTCCACATAACGGGCAGT 60485 Query 81405 CGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGAT 81464 || || ||||| | |||||| || | || | ||| |||||| ||||| |||| Sbjct 60484 ATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGAT 60425 Query 81465 ACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTT-- 81522 | || || ||| || | ||| |||| |||||| | ||||||| || ||| Sbjct 60424 ATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTG--CAGTTTTG 60367 Query 81523 GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATG 81582 |||||| |||||| |||| || |||||||| || ||||| || | |||||| Sbjct 60366 GAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATG 60307 Query 81583 TCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGG 81642 ||| |||||||| ||||| ||||| | | || || ||||| | |||||| Sbjct 60306 GCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGG 60247 Query 81643 GTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATA 81702 | |||||| |||| || | ||||||| | ||| || | | || | ||| Sbjct 60246 GAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATA 60187 Query 81703 TCGTCACCGTGAATACCGATAGCTACACGCAT 81734 ||| ||| || ||||| | || |||||||| Sbjct 60186 TCGCTACCATGGATACCTAGCGCCACACGCAT 60155 >seq11 Length=170946 Score = 125 bits (138), Expect = 8e-24 Identities = 319/476 (67%), Gaps = 21/476 (4%) Strand=Plus/Plus Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281 || ||| |||||||||| ||||| ||||| || || | ||||| || | ||| || Sbjct 63580 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 63638 Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341 ||||| | ||| ||||| | | || | ||| || | || || |||||||| Sbjct 63639 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCA 63698 Query 81342 TGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAAC 81397 ||| ||||| || | ||| | || || ||| | |||||||||| || |||| Sbjct 63699 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT-ATTACCACCCTGGTCAACATAAC 63757 Query 81398 GGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC 81457 ||||||| || || ||||| | |||||| || | ||| | || |||||| |||| Sbjct 63758 GGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTAC 63817 Query 81458 CCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACC 81517 | | || || || | | || | || ||| ||||| || ||||| | | Sbjct 63818 CAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG--C 63875 Query 81518 ACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575 | ||| |||||| |||||| |||| ||| || ||||| |||||||| || | Sbjct 63876 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 63935 Query 81576 TTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAAC 81633 |||||| ||| ||||||||| ||||| ||||| |||| ||| |||||||||||| Sbjct 63936 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG--TTTTGGAGTACCGGCATTGAAC 63993 Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTT---GACATCAGGTCATAGGTTTC 81686 | ||||| | |||||| | |||| ||| ||||||| || ||| ||||| Sbjct 63994 AACGTTGGAGAGGCGTGAGT---ATAATATTTTAGAGACATCAAGTTATACGTTTC 64046 >seq910 Length=62245 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||| | || || || |||||||| || || || || ||||| || | | || |||||| Sbjct 5 AAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCT 64 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 ||||||||| | || || | | | || ||| | ||||| || ||||||||||||||||| Sbjct 65 GGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACT 124 Query 27604 CTTCATCTAGTCTTG 27618 | ||| | |||||| Sbjct 125 TTACATTTGGTCTTG 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570303812914880