Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178425.1_202017-04- 24] 2,430 sequences; 12,162,484 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq829 170 4e-37 seq1 158 3e-33 seq773 150 4e-31 >seq829 Length=2319 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | || |||||||| ||||| || ||||| | || || Sbjct 2247 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 2188 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| || || || | || |||||| ||||||||||| || Sbjct 2187 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 2128 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| |||||||| ||||| ||||| ||| ||| || || || Sbjct 2127 TTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAG 2068 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| ||||| | |||||| ||||| | |||||| Sbjct 2067 GGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 2026 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || || | ||||| || | |||||||| || ||||| |||||||| | || || Sbjct 1563 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 1504 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || || Sbjct 1503 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 1444 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| | Sbjct 1443 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 1384 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || ||||| | ||||| Sbjct 1383 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 1342 Score = 134 bits (148), Expect = 3e-26 Identities = 165/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | ||||||||| || || ||||| || ||||| || | |||| | Sbjct 1791 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 1733 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| ||||||||||| || ||||| | | ||||| |||||||| || | Sbjct 1732 TTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC 1673 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||| || ||||| ||| ||||| || || ||||| || ||| || || | Sbjct 1672 CTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTA 1613 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || || || | ||||| Sbjct 1612 AAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 1570 >seq1 Length=236762 Score = 158 bits (174), Expect = 3e-33 Identities = 165/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| | Sbjct 232996 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 233054 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| | |||||||| || ||||| | || ||||||||| || || || | Sbjct 233055 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 233114 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 233115 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 233174 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || || || Sbjct 233175 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 233208 >seq773 Length=64736 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | |||||| || ||||| || ||||| || | ||||| Sbjct 818 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 759 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| || ||||| | || ||||||||| || || || || Sbjct 758 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 699 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 698 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 639 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || ||||| Sbjct 638 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109447056983810