Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178425.1_202017-04-
24] 2,430 sequences; 12,162,484 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq62 134 1e-26
seq52 105 5e-18
>seq62
Length=29418
Score = 134 bits (148), Expect = 1e-26
Identities = 447/690 (65%), Gaps = 34/690 (5%)
Strand=Plus/Minus
Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303
|| || ||| |||||||||| || |||| || | ||||| |||| |||| | |||
Sbjct 14505 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 14446
Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360
|| | ||| | || || || |||| | |||||| || |||||| |
Sbjct 14445 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 14392
Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
| || || || ||| ||| || || |||||||| ||| | || ||| | | || |
Sbjct 14391 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 14332
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| ||| | || |||||| || |||||||| ||||| || | || || || |||
Sbjct 14331 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGCAAGTACGTTGGTTCT 14275
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531
|| |||||||| | || ||| ||| || || |||| |||| | | || | |
Sbjct 14274 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGGGCCAAGGGT 14215
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
||| || ||| || || ||||| || | ||||| |||| | | | ||||
Sbjct 14214 GAGG-----AATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGC 14160
Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
| |||||||| || || | ||| ||| |||| ||| || |||||| | |
Sbjct 14159 AGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAG 14100
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| ||| | || |||||| | || ||||||||||||| |||||||| ||||| ||| |
Sbjct 14099 CTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGGTATGACCAATCGTA 14040
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||||||||| || | || || || ||| | || ||| | | | ||||||
Sbjct 14039 AAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 13980
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGAC 19825
| |||||||||||| ||| | | ||||||| |||| || || | ||| |
Sbjct 13979 ATTTACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGG 13920
Query 19826 AAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885
||||||| | | | |||||||| | ||| || | || || || |||||||
Sbjct 13919 AAAATAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACT 13860
Query 19886 ATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915
|| || || ||||||| |||||||
Sbjct 13859 TCTCTGGTGCTGAGATTGAGGGTTTAGTGA 13830
>seq52
Length=38857
Score = 105 bits (116), Expect = 5e-18
Identities = 360/561 (64%), Gaps = 45/561 (8%)
Strand=Plus/Minus
Query 40829 ATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGG 40888
|||||| || || || || |||||||| | | ||| ||||| || || ||||||||
Sbjct 18621 ATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGG 18562
Query 40889 ATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTACTCTGAT---TATACCAA 40945
|||||| | | | |||||||| || ||||| | || || | ||| |||||
Sbjct 18561 ATTTCAATGGAGGCATTTTGGTGCTAAATACAAGAC---GTGCGATGACGACTATACTGG 18505
Query 40946 TAAAGGAATGGATCAATT---ACAGTGCGTTATAGATACGATTAAATCCGATCCC---GA 40999
|||| || |||||||| |||| ||||| ||| |||| | ||||| ||
Sbjct 18504 ACAAGGTATTGATCAATTGAAACAG---GTTATTCATAAACTTAAGACAAATCCCTACGA 18448
Query 41000 TAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCC 41059
||| || || || || | || ||||||||| | || | | ||||| |||||
Sbjct 18447 TAGAAGA---ATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCC 18391
Query 41060 ACCTTGTCATTTGTTATGTCAGTTTTACGTTTG------CAATG---GTGAA-------- 41102
||| || ||| | || | ||||| || || | ||| | | |||
Sbjct 18390 ACCATGCCATATTTTTTCACAGTTCTATGTCAGTTTCCCCAAAGAAGGAGAAGGATCCGG 18331
Query 41103 ----------CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCC 41152
|| ||||| |||||| ||| | || |||| ||||| | || || ||
Sbjct 18330 TAAGCCCCGCCTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACC 18271
Query 41153 GTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAA 41212
||||||||| || |||||| || | || |||||||| | ||| | | | |
Sbjct 18270 GTTTAACATTGCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGA 18211
Query 41213 ACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCC 41272
|| ||||| || |||| || || || |||| |||| |||| | | ||||| || |
Sbjct 18210 GCCAGGTGAGTTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGC 18151
Query 41273 GTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGC 41332
|| | ||||||| | | |||| || |||||||| || | ||| |||||| | |
Sbjct 18150 CTTGAAAGAACAAATCTCCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGA 18091
Query 41333 TGTTGAAAACATTGATGATTT 41353
||| || |||||||||||||
Sbjct 18090 CGTTAAAGACATTGATGATTT 18070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397444229092150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |