Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178425.1_202017-04- 24] 2,430 sequences; 12,162,484 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq8 116 9e-21 seq829 114 3e-20 seq773 100 7e-16 >seq8 Length=155921 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| | Sbjct 147167 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 147225 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| ||||| | Sbjct 147226 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 147285 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || ||||| || |||||||| || | Sbjct 147286 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 147345 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||| ||||| | ||||| || Sbjct 147346 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 147376 >seq829 Length=2319 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| |||||||||| Sbjct 2004 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 1946 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || | ||||| || |||| | ||| ||||| || ||||||| Sbjct 1945 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 1886 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || || || || || ||||| || | Sbjct 1885 TCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCC 1826 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||| || ||||| | ||||| Sbjct 1825 CTGTTAGAGTTTTGACGAAAATTTGCAT 1798 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| || ||||||| Sbjct 1776 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 1718 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| | |||||| || || | | ||| |||||||| || || | Sbjct 1717 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 1658 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | |||| || || || || | ||| || ||||| | Sbjct 1657 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 1598 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| |||||| Sbjct 1597 CGGTCAAAGTCTTAACAAAGATCTGCAT 1570 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || || || |||||||| | || ||||| || || ||||||||||| | | ||| Sbjct 1562 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 1503 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || |||||||| || ||||| ||||| | || || || || | | ||| ||| Sbjct 1502 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 1443 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| || || | || | | | || ||| || ||||| | Sbjct 1442 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 1383 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || | |||||| ||||| | |||||| Sbjct 1382 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 1342 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||||||||| || ||||| ||||| | | ||||| || ||||| || || ||| Sbjct 2222 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 2163 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | || || || || | | || |||||||| ||||||||||| |||| Sbjct 2162 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 2103 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | |||| ||| || || || || || ||||| || || || ||||| Sbjct 2102 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 2043 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||| | ||||| Sbjct 2042 TTGACGAAAATTTGCAT 2026 >seq773 Length=64736 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | ||| || || |||||||||||||| || | || |||||| || Sbjct 812 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 753 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| | || || || ||||| | || || ||||| | | ||| |||||||| Sbjct 752 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 693 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || |||||| | || | | |||| ||| || ||||| | ||| || Sbjct 692 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 633 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 || || || || | |||||| |||||| Sbjct 632 GGTCTTACCAGTCAAAGTCTTAACGAAG 605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153784876510530