Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178435.1_202017-04-
21] 2,718 sequences; 12,067,109 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1645 111 1e-19
>seq1645
Length=34994
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||||||||| || | ||||||||||| ||||||||||| ||
Sbjct 12924 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTGTAGTCAG 12983
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | ||| || || || || || || |||| | | ||| ||||| ||||
Sbjct 12984 ACAAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 13043
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| ||||| ||||| | |||| ||||| | | || |
Sbjct 13044 GGATACCCTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 13103
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | ||||| || |||| ||| || ||||| ||||||||
Sbjct 13104 CCTCTAAAGTGATGGTTTTACCAGTCAAAGTCTTAACAAAGATCTGCAT 13152
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||||||||| || | ||||||||||| |||||||| |||||
Sbjct 12012 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 12071
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | || || || || || || || | || | | || ||||| ||||
Sbjct 12072 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 12131
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || |||||||| ||||| ||||| | |||| ||||| | | || |
Sbjct 12132 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 12191
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | ||||| ||||||| ||| || ||||| ||||||||
Sbjct 12192 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 12240
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||||||||||||||| | ||||| || ||||| |||||||| ||
Sbjct 12468 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 12527
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | || || ||||| || || || |||| | | || ||||| ||||
Sbjct 12528 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAG 12587
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| |||||| ||||| | |||| ||||| | || |
Sbjct 12588 GGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAA 12647
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || || ||||| || || || ||||| |||||
Sbjct 12648 CCTCTAGGGTTATAGTCTTACCCGTCAGTGTCTTGACGAAAATTTGCAT 12696
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| ||||||||||||||||| || || | || || ||||| || ||
Sbjct 13184 GTGGACTCCTTTTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 13243
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | || ||||| ||||| || || ||||||||| |||||| |||
Sbjct 13244 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 13303
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | || || || | || | ||||| ||||||| |||
Sbjct 13304 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 13363
Query 118722 TTTACAAAAATCTGCAT 118738
|| || |||||||||||
Sbjct 13364 TTGACGAAAATCTGCAT 13380
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | | ||||||||||||||| | ||||| || ||||| |||||||| ||
Sbjct 11784 TACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 11843
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | ||| || || || || ||||| | || | | ||| ||||| ||||
Sbjct 11844 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 11903
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || || ||| |||||| ||| || | || | ||||| | || |
Sbjct 11904 GGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 11963
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || || ||||| || || || ||||| |||||
Sbjct 11964 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 12012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433816029096856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |