Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178435.1_202017-04-
21] 2,718 sequences; 12,067,109 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1645 179 7e-40
seq4 147 4e-30
seq73 129 1e-24
seq1683 111 3e-19
>seq1645
Length=34994
Score = 179 bits (198), Expect = 7e-40
Identities = 182/237 (77%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| ||||||||||||| || | |||| || | |||| || || || ||
Sbjct 11776 AATTTGCATACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 11835
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| ||| |||| ||| || || |||||||| |||||||||||
Sbjct 11836 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 11895
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || |||||||||||||| ||||| |||| | || |||||| |||||
Sbjct 11896 ATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 11955
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| |||||||| || || || || || ||||||||
Sbjct 11956 AGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 12012
Score = 176 bits (194), Expect = 8e-39
Identities = 181/237 (76%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| ||||||||||| | | || || ||||| || || | ||| || || ||
Sbjct 12688 AATTTGCATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTTTGGATGTT 12747
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| || |||| || || |||||||| || |||||||||||
Sbjct 12748 GTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTCTGTTG 12807
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || |||||||||||||| ||||| | || | || |||||| |||||
Sbjct 12808 ATCCGGAGGGATACCTTCTTTATCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCGGA 12867
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| || |||||||| ||||| || || ||||||||
Sbjct 12868 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 12924
Score = 158 bits (174), Expect = 2e-33
Identities = 177/237 (75%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 12004 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 12063
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | ||||||| || || | ||| || ||||||||||| ||||| |||||
Sbjct 12064 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTG 12123
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || || || ||||| | || | || || || |||||
Sbjct 12124 ATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGA 12183
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| |||| ||| || |||||||| || | || || ||||| || |||||
Sbjct 12184 GGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 12240
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||| ||||| | | || || || | || | ||| || |||||| ||||| |
Sbjct 11556 TACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCG 11615
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| | ||||||| ||| |||| ||| || ||||||||||| ||||| || || || ||||
Sbjct 11616 ACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAG 11675
Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311
| || ||||| || ||||| ||||| | || | || |||||| || ||||| ||||
Sbjct 11676 GAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 11735
Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 11736 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 11784
Score = 152 bits (168), Expect = 9e-32
Identities = 176/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 12916 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 12975
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| ||| || | ||| || |||||||| || || ||||||||
Sbjct 12976 GTAGTCAGACAAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAGATCAACCTCTGTTG 13035
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || || || || || || ||||| | || | || || || |||||
Sbjct 13036 ATCTGGAGGGATACCCTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGA 13095
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| |||| ||| || |||||||| || | || || ||||| || |||||
Sbjct 13096 GGATTCAACCTCTAAAGTGATGGTTTTACCAGTCAAAGTCTTAACAAAGATCTGCAT 13152
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | | || || ||||| || || | ||| || ||| || || ||
Sbjct 12239 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 12298
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||||||| || |||| || || |||||||| || ||||| |||||||| |||
Sbjct 12299 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 12358
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | || | || ||||| || ||||| |||
Sbjct 12359 GGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCA 12418
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 12419 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 12468
Score = 143 bits (158), Expect = 5e-29
Identities = 174/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 12460 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 12519
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| || |||| || || |||||||| || ||||| |||||
Sbjct 12520 GTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTG 12579
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| | || | || ||||| || ||
Sbjct 12580 ATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGA 12639
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| ||||| || || || || || || ||||||||
Sbjct 12640 AGATTCAACCTCTAGGGTTATAGTCTTACCCGTCAGTGTCTTGACGAAAATTTGCAT 12696
Score = 138 bits (152), Expect = 2e-27
Identities = 178/245 (73%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | | || || ||||| || || | ||| || ||| || || ||
Sbjct 13151 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTTTGAATGTTGTAATCA 13210
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||||||| || |||| || || |||||||| || ||||| |||||||| |||
Sbjct 13211 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 13270
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | || | || || ||||||||||| |||
Sbjct 13271 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 13330
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368
||||| | ||||| |||||||| || | || || || || || ||||| | ||||||
Sbjct 13331 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 13390
Query 193369 TAAAA 193373
| |||
Sbjct 13391 TTAAA 13395
>seq4
Length=186342
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | |||| || || || || ||||||||
Sbjct 8914 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8855
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| ||
Sbjct 8854 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8795
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || |||| || | ||| |||||| || ||||| |||||
Sbjct 8794 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8735
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| || || ||||| ||||| |||| || || || || |||||||| ||
Sbjct 8734 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8684
>seq73
Length=19048
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| | || | ||||| || | ||||| ||| || |||||
Sbjct 12094 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 12035
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 12034 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 11975
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | || | ||| |||||| || ||||| |||
Sbjct 11974 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 11915
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351
||||| | ||| || || ||||| || | || || |||||
Sbjct 11914 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 11874
>seq1683
Length=17286
Score = 111 bits (122), Expect = 3e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| ||| || || | || || || || |||||
Sbjct 8591 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 8532
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 8531 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 8472
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || |||| || | | | ||| || || ||||| |||
Sbjct 8471 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACAGTGTCAATGGTGTCAGAAGATTCA 8412
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336
||||| | ||| || || ||||| ||
Sbjct 8411 ACTTCCAAAGTGATGGTCTTACCAGT 8386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899623834241760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |