Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178435.1_202017-04- 21] 2,718 sequences; 12,067,109 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1645 102 8e-17 >seq1645 Length=34994 Score = 102 bits (112), Expect = 8e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||||| | | ||||| |||||||||||||| || || || | ||||| ||||| Sbjct 13177 ATGTAAGGTGGACTCCTTTTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 13236 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||||| | |||| | | |||||||||||||| || ||||| || || |||||| Sbjct 13237 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 13296 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 || | | || | ||||||| | || ||||| | || | |||||||| || Sbjct 13297 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 13356 Query 132100 CAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133 || ||| || | |||||||||||| | |||||| Sbjct 13357 CAAAGTCTTGACGAAAATCTGCATAATCTATTAG 13390 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||||| | | ||||| ||||| ||||||||||| || ||| | ||||| ||||| Sbjct 12721 ATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 12780 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||||| | |||| | | ||||||||| ||||| || ||||||||||| |||||| Sbjct 12781 CTTACCGGCAAAGATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTT 12840 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 || | | || | ||| |||| | || || || | || | || || || || Sbjct 12841 CGACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 12900 Query 132100 CAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| | |||||| ||||| Sbjct 12901 TAGAGTTTTGACGAAAATTTGCAT 12924 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| |||||||| | | |||||||| |||||||||||||| || ||| | Sbjct 12934 CAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTGTAGTCAGACAAGGTTCT 12993 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || ||||||| | |||| | | ||||||||||||||| || || || Sbjct 12994 ACCATCTTCCAGTTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCCTC 13053 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || ||||| || | | || | || |||| | || || || | || Sbjct 13054 CTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGT 13113 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||||||||||| ||| || | || |||||||| Sbjct 13114 GATGGTTTTACCAGTCAAAGTCTTAACAAAGATCTGCAT 13152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| ||||| || | | || || ||||| ||||||||||| || ||| | ||| Sbjct 11800 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 11859 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || || ||||| | | | || | | ||||||||| ||||| || ||||||||||| Sbjct 11860 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 11919 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | || | ||| |||| | || || || | || | || Sbjct 11920 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 11979 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || || | |||||| ||||| Sbjct 11980 CTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 12012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476595007134480