Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178435.1_202017-04- 21] 2,718 sequences; 12,067,109 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1645 113 4e-20 >seq1645 Length=34994 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103 |||||| || || || ||||| || |||||||| || | | | ||||||| ||||| Sbjct 12721 ATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 12780 Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163 |||||||| | || | | |||||||||||| || | ||| |||||||| || || Sbjct 12781 CTTACCGGCAAAGATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTT 12840 Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223 || | | | || | |||||| | | |||||| ||||| ||||||| || || || Sbjct 12841 CGACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 12900 Query 27224 CAGAGTTTTCACAAAGATTTGCATA 27248 |||||||| || || ||||||||| Sbjct 12901 TAGAGTTTTGACGAAAATTTGCATA 12925 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| ||||| || | ||||| || ||||| || |||||||| || | | | | || Sbjct 11800 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 11859 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| || || ||||| || |||| | | |||||||||||| || | ||| |||||||| Sbjct 11860 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 11919 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 || || |||| | | | || | |||||| | | |||||| ||||| ||||||| Sbjct 11920 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 11979 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| || || || || ||||||||| Sbjct 11980 CTTACCTGTCAGTGTCTTGACGAAAATTTGCATA 12013 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || || || | ||||| ||| || | || | || || || ||||||||||||||||| Sbjct 11555 TTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 11614 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | | | ||||| || || |||||||| |||| | | || || || || Sbjct 11615 GACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 11674 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||| || || || || || || | | | || | |||||| | | |||| Sbjct 11675 GGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCA 11734 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| ||||||| || || ||||| || || ||||| ||||||||| Sbjct 11735 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 11785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424920323782416