Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178445.1_202017-04-
21] 490 sequences; 11,627,617 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq35 93.3 5e-14
seq39 84.2 3e-11
>seq35
Length=45345
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| || | ||||||||||||||| || ||| || ||||| || ||||||| |
Sbjct 44973 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 45032
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || | |||| || || |||||||| || || || | || || || || | ||
Sbjct 45033 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 45092
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135
| | ||||||| | ||| |||| | | | ||| | | | ||||| ||||| ||
Sbjct 45093 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 45151
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | || || || || || || || ||||| ||||| ||||||||
Sbjct 45152 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 45199
>seq39
Length=31418
Score = 84.2 bits (92), Expect = 3e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039
||| || ||| |||||| ||||| |||||||||| ||| || | |||| ||||||||
Sbjct 31414 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 31355
Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
|||||| || || || | || || || || | || | | ||||||| | ||| |||
Sbjct 31354 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGT-CTTGAATTT 31296
Query 43100 TTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 43158
| | | | ||| | | | || ||| ||||| || || | || |||||||| || |
Sbjct 31295 TCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGG 31236
Query 43159 TTAGCGTCTTTACAAAGATTTGCAT 43183
| | ||||| || || || |||||
Sbjct 31235 TCAAAGTCTTGACGAAAATCTGCAT 31211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571814097617200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |