Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178445.1_202017-04- 21] 490 sequences; 11,627,617 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 374 1e-98 seq9 219 6e-52 >seq5 Length=341950 Score = 374 bits (414), Expect = 1e-98 Identities = 1347/2077 (65%), Gaps = 55/2077 (3%) Strand=Plus/Plus Query 78714 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 61773 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 61832 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCT 78831 | | || |||||||||| ||||||||||| |||||||| ||| | || Sbjct 61833 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 61892 Query 78832 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 78889 | || | ||| |||| ||| ||| |||||| || || | | || || |||| Sbjct 61893 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 61949 Query 78890 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 78948 | || ||||| |||||||||| ||||||||||| ||| || || || || | ||| ||| Sbjct 61950 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 62008 Query 78949 TCTGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TG 79002 | ||||| |||| || | |||||||| ||| | || ||||| || || | Sbjct 62009 TGTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 62065 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 || | |||| ||| | | || || | | || | | || || || || Sbjct 62066 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 62125 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 || ||||| || || || || | || | ||| ||||| || |||||| | || Sbjct 62126 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 62185 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 ||||||| ||||| ||||| | || ||||| || ||||| ||||||| || | Sbjct 62186 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 62245 Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAG--AGAT-TCCCAATCCCAAAGATCA 79239 ||||||| ||| ||| | | || |||||||| || | ||||||||||| | | Sbjct 62246 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 62302 Query 79240 GACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTG 79299 | || | ||| | |||| | ||||| ||||| | | ||| |||||| | Sbjct 62303 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 62362 Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 | ||||| || || || ||||| | |||| ||||||| || || | | | | | Sbjct 62363 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 62422 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||| ||||| || || | |||| || | ||||| ||||||||| || Sbjct 62423 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 62482 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 ||| || || || | ||| || | ||||||||||| | | | || |||||||||||| Sbjct 62483 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 62542 Query 79480 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 79539 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 62543 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 62602 Query 79540 TTCC---TGACTATT-----ACTTTGACCACATCCTTT--AGTT---TGAGAAAATCAAA 79586 || | |||| | | | ||| | || ||| |||| || | || || | Sbjct 62603 TTACGAGTGACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 62662 Query 79587 TCGTCCATCTA--TTACAAACA-TGTTC--AACGCGACAGATGCCAGATTACAAACGGCT 79641 | ||| | || ||| | || | || || || || |||| |||||||| || Sbjct 62663 CCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCA 62722 Query 79642 ACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTT 79701 |||| | | | | |||| | |||||| ||| | ||| |||| ||| Sbjct 62723 GTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACA 62782 Query 79702 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTA 79761 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || ||| Sbjct 62783 CCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTA 62842 Query 79762 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAC 79821 ||||||||| | |||| ||| | ||| | | ||| | | | || || || || | Sbjct 62843 CCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTC 62899 Query 79822 TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || | |||| | ||||| | ||||||| || |||||||| || || | Sbjct 62900 TTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAA 62959 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 ||| ||| |||||| | ||| | | || | ||| |||| || | || Sbjct 62960 TCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACA 63019 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 || ||||| || |||||||||||||| ||||| || | |||||| | | | ||| Sbjct 63020 CGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCC 63079 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || || || ||||| ||| ||| | || | | ||||||| |||||| |||||| Sbjct 63080 TCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCC 63139 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 | ||| | ||| | | || |||| ||| || || ||||| || | || | |||||| Sbjct 63140 AGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTG 63199 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 ||||| |||| | | ||| ||||| | ||| || || ||||| || || || | || Sbjct 63200 TTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATG 63259 Query 80182 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 80241 || ||| | | |||||| ||| || |||||| || || || || |||| || Sbjct 63260 TAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAA 63319 Query 80242 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTA 80301 || || || ||| || || || || || || ||||| || || || ||||| | Sbjct 63320 ATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCA 63379 Query 80302 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 80361 | | ||||| |||||||| | ||| || ||||| || || || ||||| Sbjct 63380 ACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAG 63439 Query 80362 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 80421 ||||| ||||| ||||| ||||| | || ||||| || | ||| | || ||||| Sbjct 63440 GCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCT 63499 Query 80422 CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 80481 | || || |||| ||||| | ||| | | || || || | ||| | | |||| Sbjct 63500 CTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTG 63558 Query 80482 -TTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TG 80539 || ||| | | || ||||| |||||||||||||||||||||||| |||| || Sbjct 63559 ACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTG 63618 Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 80599 |||| |||| || || | ||| | ||||| | ||||||||| | || | || | || Sbjct 63619 AAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT 63677 Query 80600 CCATGGTGATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 80656 || || | | | || || || |||| | || ||| | || ||| || || Sbjct 63678 ---TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 63734 Query 80657 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 80716 | | | ||| || | |||| | |||| ||||| | |||| || |||| ||| || | Sbjct 63735 TATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAA 63794 Query 80717 CGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||| ||||| || |||| |||| ||||||||||| Sbjct 63795 TGGCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 63831 >seq9 Length=256340 Score = 219 bits (242), Expect = 6e-52 Identities = 591/898 (66%), Gaps = 11/898 (1%) Strand=Plus/Minus Query 49649 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 49708 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 233582 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 233524 Query 49709 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 49768 | || |||| || || |||||||||||||| || || || || || || ||| | Sbjct 233523 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 233464 Query 49769 tAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTT 49828 | || || || | || ||| || ||||| || || | ||| ||||| | | Sbjct 233463 TGTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 233404 Query 49829 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTT-GTTCAAT 49886 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 233403 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 233346 Query 49887 GGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATG 49946 || || || || | ||| | ||| | || ||| | | ||||| Sbjct 233345 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 233286 Query 49947 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 50006 |||| ||| ||||| || ||| ||||| ||| |||||||||| || | |||||| Sbjct 233285 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 233226 Query 50007 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 50066 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 233225 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 233166 Query 50067 CCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC 50126 || || || |||| ||||| | | |||||||||||| ||||| || ||| | ||| Sbjct 233165 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 233106 Query 50127 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 233105 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 233046 Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243 | |||||||| || | | | |||| ||| || || | || ||||||||||| Sbjct 233045 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCAA 232986 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 | || |||| || ||||| |||||||| || || || |||||||||| | Sbjct 232985 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 232926 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||| | ||| || ||||| || | || |||| | || |||||||| || || || Sbjct 232925 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 232866 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTT---GGGTGT 50420 |||| || || ||||| || | || || ||| | | ||||| | | Sbjct 232865 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 232806 Query 50421 TAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 232805 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 232746 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || || || || || | |||||| ||||| || | ||| ||||||| |||| Sbjct 232745 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 232688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264400603600