Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178445.1_202017-04- 21] 490 sequences; 11,627,617 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq370 104 2e-17 seq35 95.1 1e-14 >seq370 Length=286801 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 || ||||||||||| ||||| || | ||||| || || |||||| ||||| ||| | Sbjct 278252 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 278193 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 || || ||| | | || || || || ||||| ||||| |||| || Sbjct 278192 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 278133 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 |||||||| | || | ||| || || |||||||||||| || |||| || |||| || Sbjct 278132 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 278073 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||| |||||||| ||||| || || ||| | || | ||||| Sbjct 278072 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 278023 >seq35 Length=45345 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| |||||||| | || || || || || ||| | || ||| | | Sbjct 44971 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 44912 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || ||| |||||| || |||||||| | || |||||| Sbjct 44911 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 44852 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || || | |||| ||| || || ||| | |||||| || ||| || | || || || Sbjct 44851 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 44792 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| |||||||| || || || |||||| | ||| | ||||| Sbjct 44791 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGG 44745 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||||||||| || |||| || || || || ||| | || ||| | Sbjct 45199 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 45140 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || || |||||| ||||| ||||| |||| |||||| Sbjct 45139 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 45080 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| | || | ||| || || ||| ||||||| || ||| || | |||||||| Sbjct 45079 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 45020 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||| ||||| | ||||| |||||| | || | ||||| Sbjct 45019 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 44973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423037473658000