Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178445.1_202017-04-
21] 490 sequences; 11,627,617 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq35 113 1e-19
seq39 109 1e-18
seq370 104 6e-17
seq320 102 2e-16
>seq35
Length=45345
Score = 113 bits (124), Expect = 1e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||| | | || | || ||||||| ||| || || || ||
Sbjct 44780 TTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAA 44839
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | ||||||| ||||| ||||||||||| || ||||| ||| |||||
Sbjct 44840 AATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTT 44899
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| ||| ||||| || || || || || |||||||| || ||||| |||||
Sbjct 44900 GTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGAC 44959
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 44960 GAAAATTTGCAT 44971
Score = 104 bits (114), Expect = 6e-17
Identities = 151/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324
||||| |||| ||| || ||||| ||||| ||||| | ||||| | || ||||||
Sbjct 44535 ACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCT 44594
Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCC 288381
| |||||| || || ||||||| | || || ||||| || ||||| || ||
Sbjct 44595 AGTTGTTTACCGGCAAAGATCAATCTTTGCTGG---TCTGGAGGAATACCTTCCTTGTCT 44651
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
|| ||||| | || ||||| || |||| || ||||| || || || || || |||
Sbjct 44652 TGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTC 44711
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||||||||| || |||||
Sbjct 44712 TTACCTGTCAGTGTCTTGACGAAAATTTGCAT 44743
>seq39
Length=31418
Score = 109 bits (120), Expect = 1e-18
Identities = 143/197 (73%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || || || | ||||| | |||||||||| || || || || |||
Sbjct 31401 TCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAG 31342
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| | |||||| ||||| ||| ||||| || || || ||||||| || |||
Sbjct 31341 ATCAATCTTTGTTGA---TCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACG 31285
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | |||| ||||| ||||| | || || || || ||||||| |||||||
Sbjct 31284 TTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTG 31225
Query 288460 ACGAATATCTGCATTAT 288476
||||| |||||||| ||
Sbjct 31224 ACGAAAATCTGCATAAT 31208
>seq370
Length=286801
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| | || | || ||||| ||||| || || || ||
Sbjct 278058 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 278117
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | ||||| | ||| || ||||| || || ||||| || | || || ||
Sbjct 278118 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 278177
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| || || || ||||| ||||| | |||||||||
Sbjct 278178 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 278237
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 278238 GAAAATTTGCAT 278249
>seq320
Length=266
Score = 102 bits (112), Expect = 2e-16
Identities = 120/161 (75%), Gaps = 6/161 (4%)
Strand=Plus/Minus
Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCT 288372
|||||||||| || || || || ||||||| | ||||||| ||||| ||| |||
Sbjct 260 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA---TCTGGAGGGATACCT 204
Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432
|| || ||||||||||||| || ||||| || || | ||| ||||| || || |
Sbjct 203 TCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAA 144
Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || ||||||| |||||| || || ||||||||
Sbjct 143 GTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179646993982220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |