Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178445.1_202017-04- 21] 490 sequences; 11,627,617 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq35 107 2e-18 seq39 100 3e-16 >seq35 Length=45345 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| ||||| ||| ||| |||||||||||||| || || || || | |||| Sbjct 44988 AACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 45047 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || ||||| ||||| || |||| | ||||| || | |||| | ||||||| | Sbjct 45048 TCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 45106 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||| | | |||| | | | |||||| || || ||||| | ||||| || Sbjct 45107 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 45166 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| ||||| || ||||| ||||| Sbjct 45167 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 45199 >seq39 Length=31418 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| | ||| ||||||||||||||| || || || || || | |||| || ||| Sbjct 31416 AGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGC 31357 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| ||||| || |||| | ||||| || | || | | ||||||| | ||| | Sbjct 31356 TGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGT-CTTGAAT 31298 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 ||| | | |||| | | | || ||| || || || |||| ||||| |||||||| Sbjct 31297 TTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACC 31238 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| |||||||||||||| Sbjct 31237 GGTCAAAGTCTTGACGAAAATCTGCAT 31211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301168388000