Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178455.1_202017-04- 22] 3,297 sequences; 12,571,070 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq10 176 3e-39 >seq10 Length=155264 Score = 176 bits (194), Expect = 3e-39 Identities = 425/644 (66%), Gaps = 31/644 (5%) Strand=Plus/Plus Query 96912 CATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCATTTGCTTTAAAATC 96971 ||||| || || || | ||| ||||| | ||| | || ||| || || ||||| Sbjct 43906 CATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTTAACTTGAAATC 43965 Query 96972 ATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGT 97031 |||||| | || | || || ||||||| | ||||| || || ||| ||| || Sbjct 43966 ATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGT 44025 Query 97032 AAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTG 97091 | || ||| | | ||||||||||| | ||||| || ||||| || ||||| || Sbjct 44026 GATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATG 44085 Query 97092 AATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATA 97151 ||| || || || || | | || || | || ||||| | ||| |||| || ||| Sbjct 44086 AATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAATAAAGCATA 44145 Query 97152 GCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACA 97211 ||||||||||| || || || | ||||||||| || | ||| || || || Sbjct 44146 TGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCA 44205 Query 97212 GGAAAG-----------------CTT-TCCATC---------ACACACATAAAACTGACT 97244 ||||| ||| ||| || || ||||| ||||| Sbjct 44206 TGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGA 44265 Query 97245 CAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACAT 97304 || | ||| || || ||||| |||||||| || ||| ||||| |||| ||| Sbjct 44266 AAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCAT 44325 Query 97305 CAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATC 97364 | |||||||||||| || ||||| | || ||| ||| | ||| || |||||||| Sbjct 44326 AATGATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATC 44385 Query 97365 AACGCCTTCTCCACCATAATTGTGCTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTC 97422 || |||| |||| ||| | || | | || |||| |||| || |||||||||||| Sbjct 44386 AATACCTTGTCCAGTATAGTCGT-CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTC 44443 Query 97423 CATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTA 97482 ||||| ||||||||||| || || || |||||| ||| ||||| ||| || | |||| Sbjct 44444 CATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTA 44503 Query 97483 TCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526 |||||||| | ||||||||| | |||||||| | ||||| Sbjct 44504 TCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 44547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346770065460290