Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178455.1_202017-04-
22] 3,297 sequences; 12,571,070 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq6 118 9e-22
seq525 91.5 1e-13
seq574 86.0 5e-12
>seq6
Length=259691
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||| ||||| ||||| |||||||| ||||| |||||||| ||| |
Sbjct 8675 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8616
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || |||||||||||| || || ||| | || | || ||||| || ||
Sbjct 8615 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8556
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| || || || || | | ||| || || || ||| |
Sbjct 8555 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8496
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|||| |||||| || || ||||| || || ||||| ||||||||||| ||
Sbjct 8495 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8446
>seq525
Length=300
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065
|| || |||||||| ||||| |||||||| || || ||| || |||||| | |||
Sbjct 299 TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGC 240
Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125
|| || ||| |||| | ||||||||||| || | |||||||| || ||||||
Sbjct 239 TTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTA 180
Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185
||| || | | ||| || ||| || ||| || | ||| || || || || ||
Sbjct 179 CTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTT 120
Query 20186 AACGTTTTGACAAAAATTTGCAT 20208
| |||||||| |||||||||||
Sbjct 119 AGAGTTTTGACGAAAATTTGCAT 97
>seq574
Length=33616
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||| | ||| | ||||| || || || || || ||||||||||| |
Sbjct 212 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 271
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| || ||||| | || || || ||| | || | || |||||||| ||
Sbjct 272 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 331
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| |||||| || || | | | | | |||| || ||| |
Sbjct 332 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 391
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| || |||||||| |||||||| || ||||| ||||| |||||
Sbjct 392 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419570340068457
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |