Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178455.1_202017-04-
22] 3,297 sequences; 12,571,070 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq574 100 3e-16
seq525 91.5 1e-13
seq28 87.8 2e-12
>seq574
Length=33616
Score = 100 bits (110), Expect = 3e-16
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470
||||| | | |||||||| ||||||||||| || || || | ||| || || ||
Sbjct 235 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 294
Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530
||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| |||
Sbjct 295 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 353
Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588
| | |||| ||| || | ||| |||| || || || || | || | ||||||||
Sbjct 354 TCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 412
Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| ||| || || |||||||||||
Sbjct 413 GTCAAAGTCTTGACGAAAATCTGCAT 438
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| |||||||| ||||||||||| || || | ||| || || || ||||||| |
Sbjct 17 GATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCA 76
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | |||||| || ||||| |||||||| ||||| |||||| || |
Sbjct 77 AAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACG 136
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| || || ||||| | || | |||||||| |||| ||| ||
Sbjct 137 TTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTA 196
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 197 ACAAAGATCTGCAT 210
>seq525
Length=300
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| |||||||| ||||||||||| || || | || || ||||| ||||| | |
Sbjct 290 GATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCA 231
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
| || | | |||||| |||||||| ||||||||||| || ||| |||| |||| |
Sbjct 230 AAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC-TTGAATTTTACTTTTGAC 172
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||||| || || ||||| | || | || || || || |||||||
Sbjct 171 GTTG-TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTT 113
Query 138599 TTACAAAAATCTGCAT 138614
| || ||||| |||||
Sbjct 112 TGACGAAAATTTGCAT 97
>seq28
Length=31490
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||| |||||||| || || | || || ||||| ||||||| |
Sbjct 272 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCA 213
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
| || | | || ||||| ||||| |||||||| ||||| ||| |||| | ||||
Sbjct 212 AAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGACTTAAC 154
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | || || ||||| | || | || ||||| ||||| || |
Sbjct 153 GTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCT 95
Query 138599 TTACAAAAATCTGCAT 138614
| || ||||| |||||
Sbjct 94 TGACGAAAATTTGCAT 79
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496241947785840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |