Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178455.1_202017-04- 22] 3,297 sequences; 12,571,070 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq841 262 5e-65 seq1318 129 7e-25 seq3 91.5 2e-13 >seq841 Length=126892 Score = 262 bits (290), Expect = 5e-65 Identities = 889/1367 (65%), Gaps = 36/1367 (3%) Strand=Plus/Minus Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686 ||| | ||||| | || ||||| || |||||| || ||| ||| || || || || Sbjct 66843 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 66784 Query 111687 AAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745 |||||| | ||| || || |||| | ||||| | ||||| || ||||| || Sbjct 66783 TTGATGTCTCTAAAATATTTTACTC-ACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 66725 Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805 || ||| ||||||||| ||||||| | |||| | |||||||| || ||| | || || Sbjct 66724 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 66665 Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865 ||||| ||| | | |||||||| || || || ||||||||||| || | || Sbjct 66664 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 66605 Query 111866 CATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAATCAGATG 111924 |||||| | | | | ||| || || ||| |||||||| ||| || | | Sbjct 66604 TATCCATAACATTCGTTC-AACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACG 66546 Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGC 111984 || | ||||| ||| |||| || || || ||| || || ||||| |||| | ||| Sbjct 66545 GTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTA 66486 Query 111985 GTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040 | ||| || | | || | || || || |||||||| || ||||| | || Sbjct 66485 ATAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGAT 66427 Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTC 112099 || |||| | | ||||| ||| | ||||| || ||| | ||| | ||| | Sbjct 66426 TTTATTGATATTAGGAAGAACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCC 66368 Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159 ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| | | Sbjct 66367 TGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATT 66308 Query 112160 CTTTTGTCCAGACAAG-GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 112218 || | |||| ||| || || ||| | |||| ||||| |||||||| || | Sbjct 66307 ATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTC 66249 Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 112278 | || || |||||| ||||| |||| | | ||| | ||| | | | Sbjct 66248 TATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTAT 66192 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | | ||| | | ||||||| || ||||||||||| | | ||||||| || | Sbjct 66191 GGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATG 66132 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | |||||| ||| ||||||||| || || ||||| |||||| || ||| | || Sbjct 66131 CTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCT 66072 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 ||||| | |||| ||| |||||| || ||||| |||||| | || || | | Sbjct 66071 GTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTG 66012 Query 112459 CTCTCCCC------------AAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | | || | | || |||| |||| |||| | | ||| Sbjct 66011 CCTTACCAGCATTCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAA 65952 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 || | || ||| || | ||| ||| || || |||||||||| |||||| | |||| Sbjct 65951 AATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATT 65892 Query 112567 TTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTG 112626 ||||| ||||| || | ||||| ||||||||||| | ||||||| | | |||| Sbjct 65891 ACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTG 65832 Query 112627 TCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGA 112686 | ||||||||||| || ||||| || | || |||||||||| || ||||| Sbjct 65831 TTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCC 65772 Query 112687 AGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG 112746 | ||| | || ||||| || || ||||| ||| | | || || || | Sbjct 65771 GTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTG 65712 Query 112747 AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG 112806 | | || || || |||||||| ||||| || | || ||||| ||||| ||||| Sbjct 65711 AACTAGCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTA 65652 Query 112807 TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTC 112865 | || || ||||||||||||| | | ||| | || | || |||||| | || Sbjct 65651 TACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CTT 65594 Query 112866 AAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 112922 ||| || | |||| | || | ||| || | | | || || |||||||||||||| Sbjct 65593 AAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATGCCT 65536 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 65535 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 65489 >seq1318 Length=256623 Score = 129 bits (142), Expect = 7e-25 Identities = 926/1462 (63%), Gaps = 64/1462 (4%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 ||||| || ||||||| || ||| ||| | | ||||||| | |||| || Sbjct 170562 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 170503 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| || ||| || || | ||||| || ||| | ||||||||||| ||||| || Sbjct 170502 GAACGTCCTCAGCACTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 170443 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGT---GGTATGTTCATCCACGCAACACCA 111722 ||||| || |||| || | |||||| || | || |||| || || | ||| Sbjct 170442 TCTGTGCTGAAGACTTATAATTTGATGTC--GTTAAGATAC-TTCACTCATGCTTCCCCA 170386 Query 111723 ACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC 111782 || | |||||||||||||| ||| || |||||||| |||||| | ||||| | Sbjct 170385 ACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTGCCATG 170326 Query 111783 AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 ||||| || || ||| | || ||||| | ||| | | |||||||| || || || Sbjct 170325 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 170266 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAG 111901 || |||||| | || | || ||| | | || | || ||| | ||| ||| Sbjct 170265 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCC-ACAGGTTCTTATATCGC 170207 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||||| || ||| ||| | || | ||||| ||| |||| || || || || || Sbjct 170206 TGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGC 170147 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTC-----TATCTT-GA 112015 || ||||| |||| | || || |||| || || || || | |||| || Sbjct 170146 CCGTTATGTGGACCAGGGTG---GTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGA 170090 Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075 ||||||||| || |||||| | || || | || | | | || ||| | || || Sbjct 170089 GCCATGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGA 170030 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | |||| | ||| | ||| | ||| | ||||| || ||||| |||||||| | | Sbjct 170029 AATTC-GTGCAAGAGATTTGTTCCCTGCTTTATGGATCCCTGATCTTTTCATGAAACGTG 169971 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATG 112194 || | ||| ||| |||| || | |||| || || || ||| | |||| Sbjct 169970 TTCAAGAGGATGGGCCTTGGACTTTATTTTCACCCAGTGCTGCCCCAGGTTTAGATGATG 169911 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 |||||| || ||||||| || || || ||||| |||| |||| | | Sbjct 169910 TGTGGGGTGATGAATTTGAAGAACTATATACTCGTTACGAAAGAGAAGGTCGTG---GTA 169854 Query 112255 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGT 112313 || | ||| | ||||| | || ||| | |||| | || || || || ||| Sbjct 169853 AAACAATTAAAGCCCAAAAGTTGTGGTATGCCATTTTGCAAG-CACAGACAGAAACAGGT 169795 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 ||||| | ||| |||| || ||||| |||||| |||| || ||| |||| || ||| Sbjct 169794 ACACCTTTCATGGTTTATAAGGACGCATGTAACAGGAAGACAAACCAACAGAACTTAGGT 169735 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 ||||| || ||| | ||| |||||| | |||| | | | ||||| || Sbjct 169734 ACTATCAAATCATCTAACTTATGTTGTGAAATCGTCGAATATTCCTCCCCGGATGAAACT 169675 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CA--AGTATGTGGATCCAGA----GA 112485 || || ||||| | || || || || || || || || || || | |||| | Sbjct 169674 GCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGCATTCGT-TGAGGTTTCAGAAGATGG 169616 Query 112486 CAAA-----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAA 112540 ||| | | | ||| || | | | ||||| || | ||| | || | || Sbjct 169615 TAAAACTGCAAGCTATAATTTCGAGAGATTGCACGAGATTGCTAAAGTCATTACTCACAA 169556 Query 112541 CCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAA 112597 | | ||||||||||| || | |||| || || ||| ||| ||| | || || || Sbjct 169555 CTTGAACAGAGTTATCGACCGTAATTACTATCCAGTTCCCGAG---GCTAGAAATTCAAA 169499 Query 112598 TATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG 112657 ||||| || | || |||| ||| |||||||| || | || ||| | || | | Sbjct 169498 TATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGCTTGGCCGATACTTATATGATGTT 169439 Query 112658 TCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC--AATGCGCGTATATTTGAGACA 112715 || | | ||||| || || ||||| | || || || | || || || || Sbjct 169438 GCGTCTACCCTTTGAATCGGAAGAAGCTCA--AACTCTAAACAAACAAATCTTCGAAACT 169381 Query 112716 ATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAA 112775 || || || || ||||||| || | || ||||| | || ||| |||| Sbjct 169380 ATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCCCAAAAAGAAGGTAAATATTCT 169321 Query 112776 ACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGA 112834 || ||||| |||||||||||||| |||||| | | ||||| ||||||| |||| | | Sbjct 169320 ACTTTTGAAGGTTCTCCAGCTTC-CAAGGGTATTTTACAATTCGATATGT-GGAACGCTA 169263 Query 112835 GACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGT 112889 |||| || | || ||||| | || ||| || | || | || | | |||| Sbjct 169262 AACCATTTGGCATGTGGGATTGGGAAAC-CTTAAGAAAGGACATTGTTAA--ACATGGGT 169206 Query 112890 CTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 112947 | | ||| ||||| ||||||||||||||||| ||||| || | ||||| | | Sbjct 169205 -TAAGAAAC--TCTTTGACTATGGCACCAATGCCAACCGCCTCAACTTCCCAAATTCTTG 169149 Query 112948 GTAATAATGAATGCTTTGAACC 112969 || |||||||||| || ||||| Sbjct 169148 GTTATAATGAATGTTTCGAACC 169127 >seq3 Length=287643 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 ||| || ||| |||||||| | || || || || |||||| ||||||||||| ||||| Sbjct 55213 CTACGGTCGTATTGCGCCAAGGTCAGGCCTGGCAGTGAAAAACGGTATCCAAACCGGTGC 55154 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT 163660 |||||| | || || ||||| |||||||| ||||| ||| | ||||||||| Sbjct 55153 TGGTGTTGTCGACAGAGATTACACCGGTGAAGTTAAAGTAGTTTTATTCAATCAT 55099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620716817653840