Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178455.1_202017-04-
22] 3,297 sequences; 12,571,070 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq2045 145 2e-29
seq6 138 2e-27
seq525 127 4e-24
seq574 120 6e-22
seq632 105 1e-17
seq3099 95.1 2e-14
seq1 89.7 1e-12
>seq2045
Length=90587
Score = 145 bits (160), Expect = 2e-29
Identities = 167/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || || ||||||||||| | || || ||| |
Sbjct 63425 GTTCAATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGT 63484
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||||| |||| | || |||||||| |||||||||||||| ||||| ||||
Sbjct 63485 TGTAGTCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 63544
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| || ||||| || || || ||||| || | || |
Sbjct 63545 GGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAG 63604
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523
| ||||| ||||| | ||| ||||| |||||||| || || ||||
Sbjct 63605 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAA 63649
>seq6
Length=259691
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || |||| ||||| || || ||| || || || ||
Sbjct 8676 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8617
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| |||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 8616 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8557
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || || || ||||| |||| || || ||||| ||
Sbjct 8556 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8497
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| || ||||| || ||||| ||||| || || | || || ||||| ||
Sbjct 8496 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8446
>seq525
Length=300
Score = 127 bits (140), Expect = 4e-24
Identities = 138/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || || ||||| || |||| |||| || | ||| ||||||||||| || |||||
Sbjct 279 GATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCT 220
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||||||||| || || || |||||||||||||| |||||| |||| || || ||||
Sbjct 219 CTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGT 160
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|| || ||||| || ||||| || || || || || |||| ||||| | || || ||
Sbjct 159 GTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 100
Query 192534 CAT 192536
|||
Sbjct 99 CAT 97
>seq574
Length=33616
Score = 120 bits (132), Expect = 6e-22
Identities = 171/240 (71%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| || | || || | |||||| || | ||| || || || ||||||
Sbjct 209 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 268
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || || | || ||||| |||||||| ||||| |||||||| ||
Sbjct 269 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 328
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| || || || || | ||| || |||||
Sbjct 329 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 388
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT--TTTATTAG 192544
||||| | || ||||||||||| || || || || | || |||||||| | ||||||
Sbjct 389 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 448
Score = 111 bits (122), Expect = 3e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387
|| || || | ||||| || || ||| || || ||||| || |||| | || ||
Sbjct 2 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCT 61
Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447
| || ||||| |||||||| || ||||||||||| || || || ||||| || || ||
Sbjct 62 AGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGG 121
Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507
||||| || || ||| || | || || ||||| || |||| ||| |||||||||
Sbjct 122 ATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTA 181
Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || |||| ||| ||||||||
Sbjct 182 CCGGTCAAAGTCTTAACAAAGATCTGCAT 210
>seq632
Length=45374
Score = 105 bits (116), Expect = 1e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 192382 TCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTA 192441
|| |||||||| |||||||||||||| ||||| ||||| |||||||| || ||||| ||
Sbjct 10 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 69
Query 192442 TCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATG 192501
||||| || || || ||||| || | || || ||||| ||||| | ||| |||
Sbjct 70 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 129
Query 192502 GTTTTACCAGTTAATGTTTTAATAAA 192527
|| |||||||| || || || | |||
Sbjct 130 GTCTTACCAGTCAAAGTCTTGACAAA 155
>seq3099
Length=172
Score = 95.1 bits (104), Expect = 2e-14
Identities = 121/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
|| ||||||||||| | |||| | || |||| ||| ||||| ||||| || |||||
Sbjct 5 ATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTT 64
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
|||||||| || || || ||||| || ||||| ||||| || || || ||||
Sbjct 65 TGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTG 124
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|| || ||||| || ||||| || || || ||||| || | ||| ||
Sbjct 125 TCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTT 171
>seq1
Length=408578
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880
|| |||||||| || || || ||||| ||||| ||| | || ||||| || ||| |||
Sbjct 197857 AAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTT 197798
Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940
|| || ||||| | ||||||||||| | ||| || || || ||||| || || ||
Sbjct 197797 AAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAA 197738
Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000
|| | ||| || | | ||||| || | || |||| | ||||||| | | | |||
Sbjct 197737 AAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCT 197678
Query 50001 AATATCCAATTTATAGCCCAATCTGCTTT 50029
||||| ||| |||||| || || ||
Sbjct 197677 TGAATCCATCTTAAAGCCCATTCGGCCTT 197649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984438412795950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |