Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178455.1_202017-04- 22] 3,297 sequences; 12,571,070 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq841 394 1e-104 >seq841 Length=126892 Score = 394 bits (436), Expect = 1e-104 Identities = 1388/2146 (65%), Gaps = 55/2146 (3%) Strand=Plus/Plus Query 68370 CAAT-GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 |||| ||||| ||||| | | ||||| | || || | | ||||||||||||||| | Sbjct 65088 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 65147 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| || |||||||||| |||||||||||||||||||| | |||| || Sbjct 65148 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGG---GG 65204 Query 68489 CTA-TATGAATA--TTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCA 68545 | || ||| | |||| || ||| |||||| || | | | ||| || |||| Sbjct 65205 CACGTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 65264 Query 68546 TTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCAT 68605 | || || ||| ||||||| | ||||||||||| |||||| | | | || | || | Sbjct 65265 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAATTCTT 65324 Query 68606 CTGGAAGGCTCG-TATT--TTGAATGGATCCACCATCGGATATAATTATATTCT---TGA 68659 ||||| | | | || ||||||||| ||| | | |||| | || || | | Sbjct 65325 GTGGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCA 65381 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | | |||| ||| | | || || | | || | | || || || | | Sbjct 65382 TACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCT 65441 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | ||||| || ||||| || | ||| | ||| ||||| || |||||| | | ||| Sbjct 65442 GGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATT 65501 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 |||||| |||| ||||| | || |||||||| ||||| ||||||| || || Sbjct 65502 CATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAAT 65561 Query 68840 TTCTAAGACCATGTGTTATGATTTTATCTTTT----AGATGTTTCCAATCCCAAAGATCA 68895 |||||| |||||| | ||||| ||||||| || ||| ||||||||| | | Sbjct 65562 TTCTAATACCATGCTTCATGAT---ATCTTTTCTTAAGGTGTC-CCAATCCCACATGCCG 65617 Query 68896 GATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTA 68955 | ||| | ||| | ||| | ||||| || || | | ||| ||||| | Sbjct 65618 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 65677 Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015 | ||||| || || || |||| | ||||||||||||| || || | | | | | Sbjct 65678 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 65737 Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075 ||||| ||||| || || | |||| || | ||||| | ||| ||||| || Sbjct 65738 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 65797 Query 69076 TGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC 69135 |||| || || || | || || | || ||||| || | | | || |||||||||||| Sbjct 65798 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 65857 Query 69136 TTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 65858 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 65917 Query 69196 TTTCGGACTACTACTTTAAC-----CACGTCCTTT-----AGTT---TGAGAAAATCAAA 69242 || || || |||||| | || || ||| |||| || | || || | Sbjct 65918 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 65977 Query 69243 TCGTCCATCTATAA----CAAACATATTCAGT----GCTACAGATGCTAGATTACAAACT 69294 | ||| || | || ||| | || | | || || || || | |||||||| Sbjct 65978 CCATCC-TC-AGAAGTTTCAATGA-ATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACA 66034 Query 69295 GCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATA 69354 || |||| | | || |||| | || || |||| || | ||||| Sbjct 66035 GCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATG 66094 Query 69355 GTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGA 69414 || | |||| |||||| ||| ||||||| || |||||||||| || || || Sbjct 66095 ACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGT 66154 Query 69415 GTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG 69474 |||||||||||| | |||| ||| | ||| || | ||| | || || || Sbjct 66155 GTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGATA--- 66211 Query 69475 GTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAA 69534 ||||| ||| ||||| || || | |||||||| || || || || || || Sbjct 66212 GTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAA 66271 Query 69535 ACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTA 69594 ||| || |||||| | ||||| | | |||| ||| ||| || | Sbjct 66272 CAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCG 66331 Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || ||||| || ||||| |||||||| ||||| || | |||||| | | | || Sbjct 66332 ACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATT 66391 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || || || || || || ||| ||| | ||| || | ||||||| |||||||||| Sbjct 66392 TCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGT 66451 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || || || | || | | || |||| |||||| || ||||| || | || | |||| Sbjct 66452 TCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCA 66511 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 |||||||| | || | | ||| ||||| | ||| ||||| |||| ||||| |||| | Sbjct 66512 GTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCA 66571 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || ||| || ||| ||||| ||| ||| |||||| || || || || |||| Sbjct 66572 ATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTG 66631 Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954 || || | |||||| ||||| ||||| || || ||||| || || || ||||| Sbjct 66632 GAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATG 66691 Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGA 70014 || | ||||| ||||||||| | | | ||| || ||||| || || || ||| Sbjct 66692 GCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGA 66751 Query 70015 GATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATA 70074 || |||||||| || ||||| ||| | || || || ||||| | ||| | || ||| Sbjct 66752 GAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATA 66811 Query 70075 TC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133 || | || | || || |||| ||||| | ||| | | ||| || || ||||| || Sbjct 66812 TCTCTACCG-TGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCAC 66870 Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 || | || ||| | | | || || ||||| ||||||||| |||||||| |||| Sbjct 66871 TTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTA 66930 Query 70194 -TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTA 70252 |||||| ||||| || || | ||| | || || | ||||||||| | || | || | Sbjct 66931 CTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAA 66989 Query 70253 TATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGT 70312 ||| ||| | ||||| || |||| | |||||| | || ||| || || Sbjct 66990 TATTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 67049 Query 70313 TGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATA 70372 | | | |||||| | || | | |||| ||||| | |||| || |||||||| || | Sbjct 67050 TATAAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAA 67109 Query 70373 TGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTA 70432 |||| |||||||| ||||| | || || || ||||| ||||| | ||| | Sbjct 67110 TGGCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATGAACAGTAGTCATATAAGCGCATG 67169 Query 70433 TTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 |||| || ||||| | |||| ||| || ||||| || || | ||| Sbjct 67170 TTTCAGCGGCTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATA 67215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686880490771080