Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178465.1_202017-04-
21] 1,925 sequences; 12,039,202 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq34 118 9e-22
seq26 109 5e-19
seq1206 84.2 2e-11
>seq34
Length=61125
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||| ||||| ||||| |||||||| ||||| |||||||| ||| |
Sbjct 52270 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 52329
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || |||||||||||| || || ||| | || | || ||||| || ||
Sbjct 52330 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 52389
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| || || || || | | ||| || || || ||| |
Sbjct 52390 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 52449
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|||| |||||| || || ||||| || || ||||| ||||||||||| ||
Sbjct 52450 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 52499
>seq26
Length=77113
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053
||||||||||| || || |||||||| ||||| |||||||| || || ||| || |
Sbjct 32245 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 32186
Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113
||||| | ||| || || ||| |||| | ||||||||||| || | ||||||||
Sbjct 32185 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 32126
Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173
|| |||||| ||| || | | ||| || ||| || ||| || | ||| ||
Sbjct 32125 TCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATA 32066
Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| || || |||| || ||||| |||||||||||
Sbjct 32065 GTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 32031
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||||||||| || || |||||||| ||||| |||||||| || |
Sbjct 31573 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 31514
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| || ||||| | || || || ||| | || | || |||||||| ||
Sbjct 31513 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 31454
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| |||||| || || | | | | | |||| || ||| |
Sbjct 31453 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 31394
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| || |||||||| |||||||| || ||||| ||||| |||||
Sbjct 31393 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31347
>seq1206
Length=377909
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||| || || || | || ||||||||||| |||||||| || |
Sbjct 333484 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 333543
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| || ||||||||||| || || ||| | || | || ||||| || ||
Sbjct 333544 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 333603
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| ||| ||| || || | | ||| || || || ||| |
Sbjct 333604 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 333663
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200
|||| || ||||| || || ||||| || |||||||||
Sbjct 333664 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 333702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419577356090925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |