Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178465.1_202017-04- 21] 1,925 sequences; 12,039,202 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq26 122 7e-23 >seq26 Length=77113 Score = 122 bits (134), Expect = 7e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| || ||||| || ||||| || |||||||| |||||||| |||| Sbjct 31574 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 31515 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || |||| || |||||||||||| | | || || | || ||||| || Sbjct 31514 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 31455 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | || ||||||||| ||||||| ||| | | | || |||||||||| ||| || Sbjct 31454 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCA 31397 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | |||||||||||||||||| | ||| || || ||||||||||| Sbjct 31396 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31347 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| || ||||| ||||| | || ||| || |||||||| ||||||| Sbjct 32030 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 31971 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || |||| ||||| ||||||||| | |||| || | || ||||| || Sbjct 31970 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 31911 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || |||||||||| |||||| ||| | | || || |||| || || Sbjct 31910 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 31851 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || |||||||||||||| | ||| || ||||| |||||||| Sbjct 31850 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 31803 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570 ||||| ||| | ||| | ||| |||||| |||||||||||||||| || || | Sbjct 31790 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 31731 Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630 ||| || |||||||||||| | | || || | || ||||| || | || |||||| Sbjct 31730 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTT 31671 Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688 ||| ||||||| ||| | | | || || || || | ||| || ||| | ||| Sbjct 31670 GTCTTGAATTTTCGACTTAACGTTGTCG--ATAGTGTCAGAAGATTCAACCTCTAGGGTT 31613 Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| || || || || |||||||| ||||| Sbjct 31612 ATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 31575 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | |||||| || || | ||||| ||| |||||||||||| ||||| || | Sbjct 32486 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 32427 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || | || || || ||||||||| | |||| || | ||||| || || Sbjct 32426 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 32367 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || ||||||||| ||||||| ||| | | || || || | ||| || Sbjct 32366 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 32307 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | ||||| || ||||| || || || || |||||||| ||||| Sbjct 32306 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 32259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421241317051925