Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178465.1_202017-04- 21] 1,925 sequences; 12,039,202 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq26 111 1e-19 >seq26 Length=77113 Score = 111 bits (122), Expect = 1e-19 Identities = 167/236 (71%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 34748 ATCATTT-CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTAT 34806 |||| || || |||||||||||||| || | ||||| ||| || || ||||| || | Sbjct 32493 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 32434 Query 34807 AGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGT 34866 ||||||| || ||| |||| || || || || |||||||| || | || |||||||| Sbjct 32433 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 32374 Query 34867 CTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGG 34926 || | || | || |||||||| ||| ||| || ||| | || | ||| | Sbjct 32373 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 32314 Query 34927 CCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | |||||| || || || || || ||||| ||||| || |||||| Sbjct 32313 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 32258 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| ||||| ||||| || | || ||||||||||||||||| || || Sbjct 32029 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 31970 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| | || ||||| || || |||||||| || | || ||| || ||| | || Sbjct 31969 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGG 31910 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| || ||| || ||| | |||| || || ||||| Sbjct 31909 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 31850 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || |||||||| || || | |||||| ||||||||||||||| Sbjct 31849 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 31802 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| ||||| |||||||||| || ||| || || ||||| ||||| || Sbjct 31573 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 31514 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| | || || ||||| || |||||||| || | || ||| || ||| | || Sbjct 31513 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 31454 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| ||| ||| || ||| | || | || | ||||| Sbjct 31453 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 31394 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 || | ||||||||||| || || | |||||| || || ||||||||| || Sbjct 31393 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATC 31343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625983791400