Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178465.1_202017-04-
21] 1,925 sequences; 12,039,202 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq26 138 7e-28
seq1206 93.3 3e-14
seq34 93.3 3e-14
>seq26
Length=77113
Score = 138 bits (152), Expect = 7e-28
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| | || |||||| || ||||| ||||| ||
Sbjct 32030 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 31971
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||| ||| || |||||||||||||| | || |||||| | ||
Sbjct 31970 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 31911
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| | | ||| | || | |||||| ||||| |
Sbjct 31910 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 31852
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| |||||||| || || || || |||||||||||||||
Sbjct 31851 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 31802
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 31574 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 31515
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 31514 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 31455
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| |
Sbjct 31454 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 31396
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || |||||||| || || || || || || |||||||||
Sbjct 31395 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 31346
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| ||
Sbjct 31802 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 31743
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 31742 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 31683
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||| |
Sbjct 31682 AATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATAGTGTCAGAAGATTCAA 31624
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || |||||||| | || || ||||| || ||||||
Sbjct 31623 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 31574
Score = 102 bits (112), Expect = 5e-17
Identities = 164/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578
|| |||||| ||||| | || || | || |||||| ||| ||||| || ||||| ||
Sbjct 32489 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 32430
Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638
|| || || | | || || | ||| || |||||||||||||| | ||||| ||| |
Sbjct 32429 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 32370
Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697
|| | |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||
Sbjct 32369 AGGAATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCAATAGTGTCAGAAGATT 32311
Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || | || || || |||||||| | || || ||||| || ||||||
Sbjct 32310 CAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 32258
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 32258 ACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 32199
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || | ||| || || ||||||||||| | ||| ||||| | ||
Sbjct 32198 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 32139
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || |||||| ||| || | ||| | |||||| ||||| |
Sbjct 32138 GATACCTTCTTTATCTTGAATTTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 32080
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || |||||||| | || || || || || ||||||
Sbjct 32079 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCATA 32030
>seq1206
Length=377909
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || | |||| |||||||| |||||||| || ||
Sbjct 333483 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 333542
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || ||||| ||||| | || || || | ||
Sbjct 333543 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 333602
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | |||| ||| | ||||| ||||| |
Sbjct 333603 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 333661
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | ||||| || ||||| || || || || |||||
Sbjct 333662 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 333701
>seq34
Length=61125
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| |||||||| || ||||| |||||||| ||||
Sbjct 52268 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 52327
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || |||||||| || || ||||| ||||| | || || || | |
Sbjct 52328 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 52387
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | ||||| |||||
Sbjct 52388 GAATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 52446
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| ||||| || || || || || |||||
Sbjct 52447 ACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 52496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328696288296000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |