Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178475.1_202017-04-
21] 590 sequences; 11,708,619 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq300 132 5e-26
>seq300
Length=36863
Score = 132 bits (146), Expect = 5e-26
Identities = 485/746 (65%), Gaps = 30/746 (4%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| |||||||| || |||| | ||||| ||||| || ||||| || |
Sbjct 15283 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 15224
Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903
||| || || | ||| | | || || || | | | || || || ||| | ||
Sbjct 15223 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 15165
Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963
||| | || ||| | ||| || || || || || | ||| || ||| || |||
Sbjct 15164 CGA---AAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAG 15108
Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGATTA 93020
||||| ||||| | | || |||| ||||| |||||| |||||| | | |||
Sbjct 15107 CGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAATTT 15051
Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTACGA 93074
| || || || | | |||| | || || || ||| |||||| || | | |
Sbjct 15050 CCACAGCCTCGGTGACAATTTTT-----TCAACGATGGCTGGGTCTGGTTTGTTCTTCAA 14996
Query 93075 CATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT 93134
|| | ||| ||||| ||||||||||| || ||||||||||||| | ||||| |
Sbjct 14995 -ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 14937
Query 93135 CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAA 93194
| ||| || |||||||| || | || |||| || || | ||| || || || ||||
Sbjct 14936 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAA 14877
Query 93195 AACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAAT 93254
| ||| || ||||| | |||||| | || ||||| || || | | ||| ||||
Sbjct 14876 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 14817
Query 93255 TTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
||| | | || |||||| |||||||||| ||||| || | || ||
Sbjct 14816 AGGCGTCA-GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGG 14758
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373
| || | || || || || | | | || | || | | || ||||| ||||||
Sbjct 14757 ATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCG 14698
Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433
|| |||| || || ||||||| |||| ||| || || |||||||| |||||||||
Sbjct 14697 ATCAACAAGGAGTAAGTTTCAGAGTGGATATTTTCAATCATGATTTGGAAACCGTAGAAA 14638
Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493
| | || || | || || ||||| || || | || || | |||||||| ||
Sbjct 14637 CTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACA 14578
Query 93494 ATACCATCGGATGCTGCaaaaaaaGC 93519
||||| || || || || ||||| ||
Sbjct 14577 ATACCGTCAGAAGCGGCGAAAAAGGC 14552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556856693151600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |