Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04-
21] 2,013 sequences; 11,819,375 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1524 131 3e-25
seq1734 125 1e-23
seq1329 123 4e-23
seq713 114 2e-20
seq1565 113 7e-20
seq59 91.5 2e-13
>seq1524
Length=258
Score = 131 bits (144), Expect = 3e-25
Identities = 161/220 (73%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 124557 ACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTA 124616
|| |||||||| || |||||||| ||||| ||||| | || || ||| || |
Sbjct 3 ACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTC 62
Query 124617 AAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCA 124676
||| ||||||||||| || |||||||| || || ||||||||||| | ||||||||
Sbjct 63 AAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCC 122
Query 124677 GGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACT 124736
|| || ||| | || || || |||| | |||||||| ||||| ||||| || ||
Sbjct 123 GGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACG 182
Query 124737 TTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||||||||| || | || |||||||||| ||| ||
Sbjct 183 TTGCATTTGGTGTTGAGATTGAGAGGTGGTATGCAAATTT 222
>seq1734
Length=374
Score = 125 bits (138), Expect = 1e-23
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | |||||||| ||||| || |||||||| ||||| ||||| | |
Sbjct 315 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 256
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || |||||||||||| || |||||||| || || || ||
Sbjct 255 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 196
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | |||||||| || || ||| |||| ||| || |||| | || || |||
Sbjct 195 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 136
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
|||||||| || || ||| | || | || || | || | |||||||
Sbjct 135 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTA 87
>seq1329
Length=210
Score = 123 bits (136), Expect = 4e-23
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 124557 ACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTA 124616
|| |||||||| || |||||||| ||||| ||||| | || || ||| || |
Sbjct 208 ACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTC 149
Query 124617 AAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCA 124676
||| || |||||||||||||||||||| || || ||||||||||| | ||||||||
Sbjct 148 AAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCAGATCAACAAAGATTGATTTTTGCT 89
Query 124677 GGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACT 124736
|| || ||| |||| ||| || |||| || || || || || ||||| ||||| |||
Sbjct 88 GGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACT 29
Query 124737 TTGCATTTGGTTTTACGTTTACGAGGTG 124764
| || ||||| || | || ||||||
Sbjct 28 CTTCACTTGGTGTTGAGATTGAGAGGTG 1
>seq713
Length=85582
Score = 114 bits (126), Expect = 2e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | ||||| | || || || || || ||| | || ||||| | ||| || |||
Sbjct 11875 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 11934
Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667
||| | || || |||||||| || |||||||| |||||||| |||||||| |
Sbjct 11935 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 11994
Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727
|| ||||| || || ||||| || || || |||| || || || || |||||||||
Sbjct 11995 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 12054
Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || || || | || ||||||||||
Sbjct 12055 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 12095
>seq1565
Length=391305
Score = 113 bits (124), Expect = 7e-20
Identities = 359/556 (65%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 205318 CtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCA 205377
||||| || |||| ||| || ||||| |||| | | | ||||| ||| || ||
Sbjct 351659 CTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCA 351718
Query 205378 TTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTT 205437
| ||| || | ||| | |||||||| || | | ||||||| || ||| ||| |
Sbjct 351719 TCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCC 351778
Query 205438 AAATTAGTTAAATGT-GCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| | | || | | |||||||| |||||| ||| ||| |||| ||||||||
Sbjct 351779 ATGTC-GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAATGG 351837
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAG------------ 205544
||| || || ||||||||| || | ||| |||| | |||| |||
Sbjct 351838 TACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACC 351897
Query 205545 --ATATTTATTATTAATT----------ACATGAAATTGTACAAAACAATGACAAGGTGG 205592
|| || | || || |||| || ||| |||| ||| || || ||
Sbjct 351898 GGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGCGG 351957
Query 205593 TATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTC 205652
| | |||| || |||| ||| || |||||||| | | || || ||||| |
Sbjct 351958 CAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTA 352017
Query 205653 AGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATA 205712
|| || | |||| ||||| |||| ||| | |||||||||| ||||| |||||
Sbjct 352018 GGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATA 352077
Query 205713 ATTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTG 205771
| ||| || || | ||||||||||||||||| | ||||||||| |||||||| |
Sbjct 352078 GTCGTCATCGCACGTCT-TGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGG 352136
Query 205772 GACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttATATATTTTAATGATC 205831
| || | ||| ||| |||| ||||| || || || || | || ||||| ||||
Sbjct 352137 GCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATC 352196
Query 205832 CATTTTCATCCCAAAT 205847
|||| | ||||||||
Sbjct 352197 CATTACCGTCCCAAAT 352212
>seq59
Length=31170
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | || || ||||| ||||| | || ||||| |
Sbjct 454 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 395
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || |||||||||||| || |||||||| || || ||||||
Sbjct 394 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 335
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || || |||| || || |||| | ||||| ||
Sbjct 334 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 275
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || || || || ||| | || || | || ||||||||||
Sbjct 274 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTAT 225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755436990838400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |