Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04- 21] 2,013 sequences; 11,819,375 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1329 109 5e-19 seq1524 105 6e-18 seq1136 104 2e-17 seq1734 95.1 1e-14 seq713 93.3 4e-14 >seq1329 Length=210 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 115302 AAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAA- 115360 |||| || || || || || || ||| | || || || ||||||| ||| |||| Sbjct 210 AAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTG-ACAAC 152 Query 115361 GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTAT 115420 || ||| || ||| ||||||||||| |||| ||||| |||||| | |||| | Sbjct 151 GTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCAGATCAACAAAGATTGATTTTT 92 Query 115421 GCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCT 115480 || || || ||| ||||||||| | |||| || | || || ||||| ||||| || ||| Sbjct 91 GCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCT 32 Query 115481 ACTATACATATGGTGTTGAGATTGCGAGG 115509 ||| | || |||||||||||||| |||| Sbjct 31 ACTCTTCACTTGGTGTTGAGATTGAGAGG 3 >seq1524 Length=258 Score = 105 bits (116), Expect = 6e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 115302 AAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAA- 115360 |||| || || || || || || ||| | || || || ||||||| ||| |||| Sbjct 1 AAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTG-ACAAC 59 Query 115361 GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTAT 115420 || ||| |||||| || || ||||| | || ||||| |||||| | |||| | Sbjct 60 GTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTT 119 Query 115421 GCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCT 115480 || || || ||| | ||||| | | ||| || | |||||||||||||| ||||||||| Sbjct 120 GCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCT 179 Query 115481 ACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || | ||| |||||||||||||| |||| || Sbjct 180 ACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 211 >seq1136 Length=6020 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||| ||||| || | || || || || |||||| | ||| || || Sbjct 3455 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 3396 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || || || || || ||||| | || ||| Sbjct 3395 TCTGACACTATT-GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 3337 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || || ||||| ||||||| | ||| || |||| || Sbjct 3336 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 3277 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || |||||| |||| |||| ||||||||| |||| || Sbjct 3276 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 3226 >seq1734 Length=374 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || || || || || || || ||| | || || || Sbjct 315 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 256 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || |||||| || || ||||| | || || || Sbjct 255 GACACTATT-GACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 197 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| ||| || || ||| ||||||||| | ||| || | || || || Sbjct 196 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 137 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||| ||||| ||| | || | || ||||| ||| | || || || Sbjct 136 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAA 86 >seq713 Length=85582 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 ||||||||| || | || || || ||||| || | ||| || || |||||| | Sbjct 11874 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 11933 Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412 || |||| || || ||| ||| || || ||||| |||| ||| || |||||| Sbjct 11934 TG-ACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 11992 Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472 | || | ||| || || ||||| ||||| | | |||| || | || || |||||||||| Sbjct 11993 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 12052 Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || ||| | || | || ||||||||| |||| || Sbjct 12053 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 12092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425333564849560