Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04- 21] 2,013 sequences; 11,819,375 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1 145 9e-30 >seq1 Length=536167 Score = 145 bits (160), Expect = 9e-30 Identities = 337/504 (67%), Gaps = 12/504 (2%) Strand=Plus/Plus Query 138188 AATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATT 138247 ||| ||| || | | ||||| ||||| ||||| ||||| | ||||||||||||||||| Sbjct 227545 AATGGGAGCTCCAGCTGGACCACCACCACCATGAGGAATGGAAAATGTCTTATGTAAATT 227604 Query 138248 TAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAG 138307 | || || |||||||||||| || | ||| | ||| || ||||| ||||| | Sbjct 227605 CAAGTGGCAAACATCTGCACCAAGATCTCCGGGTGAAGTTAGCCCAACCTGCGCATTCAT 227664 Query 138308 ATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTC 138366 ||| |||||||| | ||| || || |||||| ||| ||||| | | ||| | ||| Sbjct 227665 ATTAGCACCATCCAAATAGACTTGTCCACCAAAAGAATGTACGATATCA-ATAGCATGTT 227723 Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAG-- 138424 |||| || |||||||| ||| | ||| || ||||| || ||||| | | || Sbjct 227724 GGATGCCTGGTTCAAATAAACCGTAAGTGGAAGGATAGGTGATCATTACGGCGGCTAGTT 227783 Query 138425 --TTCAAATG-TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATC 138481 ||| |||| | |||| || || |||| || || | |||| |||||| Sbjct 227784 CTTTCGAATGTTGTTCA-----GCCTTATTCTTTAAGTCAACCAGATCTAATGAGCCATC 227838 Query 138482 ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGT 138541 | ||| |||||| |||||||| | || ||||| | ||| ||| ||||| || Sbjct 227839 CTGCAAACAGTTGACAGGAACAACTTTTAAACCCGCCATAGCGGCAGAAGCCGGATTTGT 227898 Query 138542 TCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATG 138601 ||||| || || | || || | ||| || || | | || || ||| | || | Sbjct 227899 ACCATGAGCGGATACAGGGATTAAACACACGTTACGATGATTTTCACCTTTGCTTTCCAG 227958 Query 138602 ATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAA 138661 || | | |||| | ||| || | ||| ||||| || | |||| || |||||||| Sbjct 227959 GTAGGATCTGATTACCCTCAGACCAGTATATTCACCTTGAGCACCTGAATTTGGTTGTAA 228018 Query 138662 TGATATAGAATCAAAACCTGTGAT 138685 || ||| ||| |||||||| || Sbjct 228019 AGAAATACCATCGAAACCTGTAAT 228042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578983830952760