Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04-
21] 2,013 sequences; 11,819,375 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1524 183 5e-41
seq1734 156 8e-33
seq1329 154 3e-32
seq1136 147 4e-30
seq59 138 2e-27
seq713 129 1e-24
seq39 114 2e-20
>seq1524
Length=258
Score = 183 bits (202), Expect = 5e-41
Identities = 173/221 (78%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 221 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 162
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | ||||||| || || | ||| || ||||||||||| ||||| |||||
Sbjct 161 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTG 102
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| |||| | || |||||| |||||
Sbjct 101 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 42
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTT 193344
||| ||||| ||||| |||||||| || |||||||| ||||
Sbjct 41 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTT 1
>seq1734
Length=374
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||| ||||| | | || || || | || | ||| || |||||| ||||| |
Sbjct 87 TACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCG 146
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| | ||||||| ||| |||| ||| || ||||||||||| ||||| || || || ||||
Sbjct 147 ACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAG 206
Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311
| || ||||| || ||||| ||||| | || | || |||||| || ||||| ||||
Sbjct 207 GAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 266
Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 267 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 315
>seq1329
Length=210
Score = 154 bits (170), Expect = 3e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 193135 CACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATA 193194
|||||||||||| | |||| || | |||| || || || || ||||| || |
Sbjct 1 CACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACA 60
Query 193195 ACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTA 193254
| |||||| ||| |||| ||| || || |||||||| ||||| |||||||| ||||| |
Sbjct 61 AGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGGA 120
Query 193255 TTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTT 193314
| |||||||||||||| || || |||| | || |||||| |||||||| ||||| |
Sbjct 121 TACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCT 180
Query 193315 CTAGAGTTATAGTTTTACCTGTTAGCGTTT 193344
|||| |||||||| || |||||||| ||||
Sbjct 181 CTAGGGTTATAGTCTTCCCTGTTAGAGTTT 210
>seq1136
Length=6020
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | |||| || || || || ||||||||
Sbjct 3225 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 3284
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| ||
Sbjct 3285 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 3344
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || |||| || | ||| |||||| || ||||| |||||
Sbjct 3345 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 3404
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| || || ||||| ||||| |||| || || || || |||||||| ||
Sbjct 3405 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 3455
>seq59
Length=31170
Score = 138 bits (152), Expect = 2e-27
Identities = 178/245 (73%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | | || || ||||| || || | ||| || ||| || || ||
Sbjct 225 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 284
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||||||| || |||| || || |||||||| || ||||| |||||||| |||
Sbjct 285 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 344
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | || | || || ||||||||||| |||
Sbjct 345 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 404
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368
||||| | ||||| |||||||| || | || || || || || ||||| | ||||||
Sbjct 405 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 464
Query 193369 TAAAA 193373
| |||
Sbjct 465 TTAAA 469
Score = 114 bits (126), Expect = 2e-20
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 193135 CACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATA 193194
|||||||||||| | |||| || | |||| || || || || ||||| || |
Sbjct 1 CACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACA 60
Query 193195 ACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTA 193254
| |||||| || |||| || || |||||||| || || ||||||||||| ||||| |
Sbjct 61 AGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGA 120
Query 193255 TTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTT 193314
| ||||| || || || ||||| | || | || || || ||||| || ||||| |
Sbjct 121 TACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCT 180
Query 193315 CTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||| || |||||||| || | || || ||||| || |||||
Sbjct 181 CTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 226
>seq713
Length=85582
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| | || | ||||| || | ||||| ||| || |||||
Sbjct 12095 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 12036
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 12035 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 11976
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | || | ||| |||||| || ||||| |||
Sbjct 11975 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 11916
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351
||||| | ||| || || ||||| || | || || |||||
Sbjct 11915 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 11875
>seq39
Length=54382
Score = 114 bits (126), Expect = 2e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| ||| || || | || || || || |||||
Sbjct 14706 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 14647
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 14646 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 14587
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || |||| || | ||| ||| || || ||||| |||
Sbjct 14586 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 14527
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336
||||| | ||| || || ||||| ||
Sbjct 14526 ACTTCCAAAGTGATGGTCTTACCAGT 14501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899631762446160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |