Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04-
21] 2,013 sequences; 11,819,375 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq1524 127 3e-24
seq1329 127 3e-24
seq713 107 3e-18
seq59 87.8 3e-12
>seq1524
Length=258
Score = 127 bits (140), Expect = 3e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 146047 AAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATG 146106
|||| ||||||| || || || || | || || ||| | ||| |||||| | || |
Sbjct 1 AAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACG 60
Query 146107 TAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTG 146166
| |||| |||||| ||| || ||||| ||||| || |||||||||||| | |||||||
Sbjct 61 TCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTG 120
Query 146167 CAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGA 146226
| ||||| ||| | || || ||||||| | | |||||||| || || ||||| || |
Sbjct 121 CCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTA 180
Query 146227 CTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| | ||||| || || |||| ||||| ||||
Sbjct 181 CGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 213
>seq1329
Length=210
Score = 127 bits (140), Expect = 3e-24
Identities = 153/208 (74%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 146047 AAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATG 146106
|||| ||||||| || || || || | || || ||| | ||| |||||| | || |
Sbjct 210 AAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACG 151
Query 146107 TAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTG 146166
| |||| ||| || ||| ||||||||| || || || |||||||||||| | |||||||
Sbjct 150 TCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCAGATCAACAAAGATTGATTTTTG 91
Query 146167 CAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGA 146226
| ||||| ||| |||| ||| |||||| || | || || || || ||||| ||||| |
Sbjct 90 CTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTA 31
Query 146227 CTATCCATTTAGTATTACGATTAAGAGG 146254
|| | || || || || |||| |||||
Sbjct 30 CTCTTCACTTGGTGTTGAGATTGAGAGG 3
>seq713
Length=85582
Score = 107 bits (118), Expect = 3e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105
|| || || || || || || || ||| | || || ||| | || |||||| | |||
Sbjct 11881 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 11940
Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165
|| || || || ||| || ||||| || ||||| || ||||||||| | || |||
Sbjct 11941 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 12000
Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225
|| ||||| ||||| || || |||||| || | || || || || |||||||||||
Sbjct 12001 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 12060
Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
||| | || ||||| || |||| ||||| ||||
Sbjct 12061 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 12094
>seq59
Length=31170
Score = 87.8 bits (96), Expect = 3e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || || || || || ||||| || || | || || ||| | ||
Sbjct 453 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 394
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || | || || || ||||| ||| || ||||| || || || |||||||
Sbjct 393 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 334
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || |
Sbjct 333 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 274
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || || || || | ||| | || || | ||||||| ||||
Sbjct 273 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786146618087960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |