Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04- 21] 2,013 sequences; 11,819,375 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1734 102 7e-17 seq1329 98.7 9e-16 seq1524 95.1 1e-14 seq59 91.5 1e-13 seq713 89.7 5e-13 seq1136 84.2 2e-11 >seq1734 Length=374 Score = 102 bits (112), Expect = 7e-17 Identities = 169/242 (70%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || ||| | || || || | || || | || || ||| | Sbjct 315 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 256 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || |||||| || || || ||||| || || || ||| Sbjct 255 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 196 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 |||||| | |||| | ||| || ||||| ||||||| ||||| |||| | | |||| Sbjct 195 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGG--ACTACA 138 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCAT 25412 |||||||||| || ||||| |||| | || || || ||||| || || || |||||| Sbjct 137 ATATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAACTGATCAG 78 Query 25413 TC 25414 || Sbjct 77 TC 76 >seq1329 Length=210 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 25191 AAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAG 25250 |||| |||| || || | || || | || || ||| | ||| ||||| || | | Sbjct 210 AAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACG 151 Query 25251 TAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACG 25310 | ||| || ||| |||||||| ||||| || || ||||| |||||| | |||| | Sbjct 150 TCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCAGATCAACAAAGATTGATTTTTG 91 Query 25311 GCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAATC 25368 || || ||||| ||||||| ||||| |||| | | ||||| || ||||| ||||| Sbjct 90 CTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTG--ACTACAACATCCAAAAGGAATC 33 Query 25369 CACCATTCATTTAGTGTTAAGATTGAGAGG 25398 || |||| || ||||| ||||||||||| Sbjct 32 TACTCTTCACTTGGTGTTGAGATTGAGAGG 3 >seq1524 Length=258 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 25191 AAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAG 25250 |||| |||| || || | || || | || || ||| | ||| ||||| || | | Sbjct 1 AAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACG 60 Query 25251 TAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACG 25310 | ||| |||||| || || || ||||| || || ||||| |||||| | |||| | Sbjct 61 TCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTG 120 Query 25311 GCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAATC 25368 ||| || ||||| ||||| | ||||| |||| | |||| || ||||| ||||| || Sbjct 121 CCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTG--ATTATAACATTCAGAAAGAGTC 178 Query 25369 CACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || | ||||| ||||| ||||||||||| || Sbjct 179 TACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 211 >seq59 Length=31170 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || || ||||| ||| | ||||| | || || ||| || | Sbjct 226 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 167 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || ||||| || || || ||||| || || ||||| Sbjct 166 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 107 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || || | || | | ||| || || || ||||| | ||||| |||| | | |||| Sbjct 106 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTG--ACTACA 49 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGG 25398 | || ||||| ||||| || |||| || ||||| ||||||||||| Sbjct 48 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGG 3 >seq713 Length=85582 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| || || || || || || | ||||| | ||||| ||| | || ||||| Sbjct 11875 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 11934 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || || ||| ||| || || || ||||| || || || || |||||| | Sbjct 11935 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 11994 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361 || | | || || ||| | ||||| | ||||| |||| | | ||||| ||||||| Sbjct 11995 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATTCAAA 12052 Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||| | || ||||| || ||||||||||| || Sbjct 12053 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 12092 >seq1136 Length=6020 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | || || || || |||||||| || | || || | ||||| ||| | Sbjct 3456 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 3397 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || ||||| || | || || || || || || || ||||| || || || Sbjct 3396 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 3337 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 || |||||| | || | | || || ||| | ||||||| ||||| | | ||| || Sbjct 3336 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 3277 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| || ||||| ||||| || | || || || || ||||||||||| || Sbjct 3276 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 3226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445083200312160