Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04- 21] 2,013 sequences; 11,819,375 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq11 143 2e-29 seq1565 93.3 3e-14 >seq11 Length=123023 Score = 143 bits (158), Expect = 2e-29 Identities = 449/690 (65%), Gaps = 34/690 (5%) Strand=Plus/Minus Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303 || || ||| |||||||||| || |||| || | ||||| |||| |||| | ||| Sbjct 46907 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 46848 Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360 || | ||| | || || || |||| | |||||| || |||||| | Sbjct 46847 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 46794 Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417 | || || || ||| ||| || || |||||||| ||| | || ||| | | || | Sbjct 46793 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 46734 Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476 | ||| | || |||||| || |||||||| ||||| || | ||| || || ||| Sbjct 46733 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGTAAGTACGTTGGTTCT 46677 Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531 || |||||||| | || ||| ||| || || |||| |||| | | || | | Sbjct 46676 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGGGCCAAGGGT 46617 Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591 ||| || ||| || || ||||| || | ||||| |||| | | | |||| Sbjct 46616 GAGG-----AATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGC 46562 Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645 | |||||||| || || | ||| ||| |||| ||| || |||||| | | Sbjct 46561 AGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAG 46502 Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705 | ||| | || |||||| | ||| ||||||||||||| |||||||| ||||| ||| | Sbjct 46501 CTAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTGGTATGACCAATCGTA 46442 Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765 || ||||||||||| || | || || || ||| | || ||| | | | |||||| Sbjct 46441 AAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 46382 Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGAC 19825 | |||||||||||| ||| | | ||||||| |||| || || | ||| | Sbjct 46381 ATTTACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGG 46322 Query 19826 AAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885 ||||||| | | | |||||||| | ||| || | || || || ||||||| Sbjct 46321 AAAATAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACT 46262 Query 19886 ATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915 || || || ||||||| ||||||| Sbjct 46261 TCTCTGGTGCTGAGATTGAGGGTTTAGTGA 46232 >seq1565 Length=391305 Score = 93.3 bits (102), Expect = 3e-14 Identities = 171/251 (68%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 || ||||| |||||| ||| | || |||| ||||| | || || || |||||||| Sbjct 351885 CTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACCATTTAACATT 351826 Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222 || |||||| || | || |||||||| | ||| | | | | || ||||| Sbjct 351825 GCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAG 351766 Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282 || |||| || || || |||| |||| |||| | | ||||| || | || | |||| Sbjct 351765 TTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGCCTTGAAAGAA 351706 Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342 ||| | | |||| || |||||||| || | ||| |||||| | | ||| || || Sbjct 351705 CAAATCTCCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGACGTTAAAGAC 351646 Query 41343 ATTGATGATTT 41353 ||||||||||| Sbjct 351645 ATTGATGATTT 351635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397446249038065