Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04- 21] 2,013 sequences; 11,819,375 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1524 82.4 5e-11 >seq1524 Length=258 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/217 (69%), Gaps = 12/217 (6%) Strand=Plus/Plus Query 27806 AAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACCGACGATGT--ACAATC 27863 ||||||| || ||||| ||| || | || || ||| ||||| | | |||| Sbjct 1 AAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAAC- 59 Query 27864 GGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTT 27923 |||||| ||||| ||||| |||||| |||| || || ||| | || ||||| Sbjct 60 -GTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTT 118 Query 27924 TGCCGGAAAACAATTGGACGAC----GAACGCAGCTTGTCCGATTACAACATCCAAAAAG 27979 |||||| || ||| |||| ||| |||||| |||| ||||| ||||| || |||| Sbjct 119 TGCCGGTAAGCAACTGGAAGACGGTAGAACGC----TGTCTGATTATAACATTCAGAAAG 174 Query 27980 AGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || || ||||||||||| ||| | ||| | || || Sbjct 175 AGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355853669472051