Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04- 21] 1,028 sequences; 11,708,083 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq438 132 1e-25 seq10 87.8 4e-12 >seq438 Length=125659 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 334137 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 334196 |||| |||||||||||| ||| |||| | ||||| || ||||||||| |||| Sbjct 119025 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 119084 Query 334197 TGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 334256 || || || |||| | ||||| ||||| ||||| || || || || || ||||| ||| Sbjct 119085 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 119144 Query 334257 CCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCA 334316 || || | | || ||||||| | || | || ||||| || | ||||| ||||| Sbjct 119145 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 119204 Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct 119205 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 119242 >seq10 Length=230346 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 334182 GGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCG 334241 ||||| || |||| |||||||| ||||||| | ||| | ||| || ||||| ||| Sbjct 142315 GGGAAACCATCAACTTGACCGTTGGCAATAGCTCTCATTAAAGTGGACTTACCACAACCG 142256 Query 334242 TTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGA 334301 ||||| ||||| | ||| || | | | | ||||| | || | || ||||||| Sbjct 142255 TTTGGACCACAGATACCATATCTTCTGGCTCTCTTCAATCTTAATTGGGTCTTGTTCAAC 142196 Query 334302 AGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | ||||| ||||||| |||| |||||||||||| | ||| | || ||||| Sbjct 142195 AAGATTTTAGCACCATAAGCCAAAGAAAATTCACAGTTACATAAGTCTTCACC 142143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102865473691800