Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04-
21] 1,028 sequences; 11,708,083 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq10 123 2e-23
seq76 109 5e-19
seq341 107 2e-18
seq420 89.7 5e-13
seq55 86.0 6e-12
seq157 84.2 2e-11
seq2 82.4 7e-11
>seq10
Length=230346
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || |||||||||||||| || || ||| | ||| || |
Sbjct 8714 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 8655
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 8654 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 8595
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 8594 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 8535
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 8534 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 8499
>seq76
Length=15497
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
|||||| || || || || || || |||||||| ||||| || || | ||| ||
Sbjct 287 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 228
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| ||
Sbjct 227 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 168
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||||||| |||| | | | || | || | ||||| ||||| || || || || || |
Sbjct 167 GTCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 109
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||||||||||||
Sbjct 108 TAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 72
>seq341
Length=201
Score = 107 bits (118), Expect = 2e-18
Identities = 146/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||||| ||| || || || || || |||||||| | ||| || || |||| |||
Sbjct 200 ATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTG 141
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| || || | ||||||| ||| || || || ||||| ||||| || |||||||||||
Sbjct 140 CTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTT 81
Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
||||| || | || | ||||||||||| || || || || || | || || || |
Sbjct 80 ACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTG 22
Query 45316 TTAGAGTTTTTACAAAAATTT 45336
|||||||||| || |||||||
Sbjct 21 TTAGAGTTTTGACGAAAATTT 1
>seq420
Length=183
Score = 89.7 bits (98), Expect = 5e-13
Identities = 118/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | || || || |||||||||||||| || || || | |||| || |
Sbjct 160 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 101
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || || || | ||||||| || || ||||| || || |||||||||
Sbjct 100 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 41
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAG 45285
|||||||| || ||||| || | || | ||||||||||
Sbjct 40 TCTTGAATCTTACTTTTGA-CGTTGTCAATAGTGTCGGAAG 1
>seq55
Length=31633
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||| | ||| ||||| | || || ||||| || || || ||||| | ||| ||
Sbjct 31385 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 31326
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | || || || || | ||||||| ||| || || || || || |||||
Sbjct 31325 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 31266
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||||| |||| | | | || | || | ||| |||||||| || ||||| | ||
Sbjct 31265 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 31207
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | ||| || || ||||| |||||
Sbjct 31206 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31168
>seq157
Length=15234
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || |||||||||||||| || || || | ||| ||
Sbjct 614 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 673
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 674 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 733
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 734 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 793
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 794 GTCTTACCAGTCAAAGTCTTAACGAA 819
>seq2
Length=340854
Score = 82.4 bits (90), Expect = 7e-11
Identities = 200/303 (66%), Gaps = 0/303 (0%)
Strand=Plus/Minus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
|||| |||||||| | ||||| || ||| ||||| || |||| | | |
Sbjct 63841 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 63782
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
|| ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | ||
Sbjct 63781 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 63722
Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020
||||| || ||||| || | |||||||||| ||||| ||| || ||||| |
Sbjct 63721 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 63662
Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080
|| || |||||| ||||| || ||||| |||| || ||||| ||| | ||
Sbjct 63661 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 63602
Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140
|| || ||| ||| || || || || || ||| || || || |||||||||
Sbjct 63601 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 63542
Query 123141 AAA 123143
|||
Sbjct 63541 AAA 63539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451997391758880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |