Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04- 21] 1,028 sequences; 11,708,083 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq10 152 4e-32 seq429 136 3e-27 seq157 123 2e-23 seq420 118 8e-22 seq341 116 3e-21 seq76 109 4e-19 seq55 107 2e-18 >seq10 Length=230346 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || || || |||||||| ||||| || ||||| |||| Sbjct 8726 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8667 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||||||||| ||||| ||||| | ||||| || || ||| Sbjct 8666 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8607 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| | || | ||||||||| | ||| ||| Sbjct 8606 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8547 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | || || ||||||||||| || || || || ||||| Sbjct 8546 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8500 >seq429 Length=18768 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || ||||| || | || ||||||||||| || ||||| || | Sbjct 6673 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 6732 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || |||||||||||||| ||||| ||||| | ||||| || || || Sbjct 6733 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 6792 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| ||| || ||| | || | ||||||||| | ||| ||| Sbjct 6793 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 6852 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | ||||| || || || || ||||| || ||||| Sbjct 6853 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 6890 >seq157 Length=15234 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | || || ||||| | || ||||| ||||| || ||||| || | Sbjct 602 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 661 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| ||||| ||||| | ||||| || || || Sbjct 662 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 721 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| | || | |||||||| | ||| ||| Sbjct 722 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 781 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | ||||| || || || || ||||| || || || Sbjct 782 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 819 >seq420 Length=183 Score = 118 bits (130), Expect = 8e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || ||||| |||||||| ||||| || ||||| || | Sbjct 172 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 113 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| || | ||||||||| ||||| ||||| | ||||||||| || || Sbjct 112 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 53 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 || ||||||||||||||||| || ||| || | || | |||||| || Sbjct 52 ATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGA 3 >seq341 Length=201 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 101265 AATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATT 101324 |||| | ||||| ||||| || || || ||||| | | ||||| | || |||| || Sbjct 201 AATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTT 142 Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 ||||||| ||||| ||||| | |||||||| || ||||| ||||| || |||||||||| Sbjct 141 GCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTT 82 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||| || | || | |||||| || | ||| || || || || | || || || | Sbjct 81 TACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTG 22 Query 101445 TTAAAGTTTTTACAAATAT 101463 ||| |||||| || || || Sbjct 21 TTAGAGTTTTGACGAAAAT 3 >seq76 Length=15497 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || || ||||| |||||||| || | | ||||| |||| || | |||| Sbjct 274 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGC 215 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| ||||| | || || || || ||||| ||||| || ||||||||||| Sbjct 214 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTC 155 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||||||| | ||| || || || || | || || || || Sbjct 154 GACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTC 95 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| || ||||| Sbjct 94 AGTGTCTTGACAAAAATTTGCAT 72 >seq55 Length=31633 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||| | || || | ||| | ||| || || || || || |||||||| | Sbjct 31394 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 31335 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || | |||||||| ||||| ||||| | |||||||| || || Sbjct 31334 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 31275 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||||||||| || || | || | || || || | ||| ||| Sbjct 31274 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 31215 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | ||||| ||||| ||||| || || || |||||||| Sbjct 31214 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396273435126996