Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04- 21] 1,028 sequences; 11,708,083 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq11 131 1e-25 seq7 93.3 3e-14 >seq11 Length=222572 Score = 131 bits (144), Expect = 1e-25 Identities = 446/690 (65%), Gaps = 34/690 (5%) Strand=Plus/Minus Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303 || || ||| |||||||||| || |||| || | ||||| |||| |||| | ||| Sbjct 144983 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 144924 Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360 || | ||| | || || || |||| | |||||| || |||||| | Sbjct 144923 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 144870 Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417 | || || || ||| ||| || || |||||||| ||| | || ||| | | || | Sbjct 144869 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 144810 Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476 | ||| | || |||||| || |||||||| ||||| || | || || || ||| Sbjct 144809 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGCAAGTACGTTGGTTCT 144753 Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531 || |||||||| | || ||| ||| || || |||| |||| | | || | | Sbjct 144752 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGGGCCAAGGGT 144693 Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591 ||| || ||| || || ||||| || | ||||| |||| | | | |||| Sbjct 144692 GAGG-----AATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGC 144638 Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645 | |||||||| || || | ||| ||| |||| ||| || |||||| | | Sbjct 144637 AGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAG 144578 Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705 | ||| | || |||||| | || ||||||||||||| |||||||| ||||| ||| | Sbjct 144577 CTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGGTATGACCAATCGTA 144518 Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765 || ||||||||| | || | || || || ||| | || ||| | | | |||||| Sbjct 144517 AAGATTTAATAGACGGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 144458 Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGAC 19825 | |||||||||||| ||| | | ||||||| |||| || || | ||| | Sbjct 144457 ATTTACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGG 144398 Query 19826 AAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885 ||||||| | | | |||||||| | ||| || | || || || ||||||| Sbjct 144397 AAAATAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACT 144338 Query 19886 ATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915 || || || ||||||| ||||||| Sbjct 144337 TCTCTGGTGCTGAGATTGAGGGTTTAGTGA 144308 >seq7 Length=262544 Score = 93.3 bits (102), Expect = 3e-14 Identities = 171/251 (68%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 || ||||| |||||| ||| | || |||| ||||| | || || || |||||||| Sbjct 20347 CTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACCATTTAACATT 20406 Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222 || |||||| || | || |||||||| | ||| | | | | || ||||| Sbjct 20407 GCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAG 20466 Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282 || |||| || || || |||| |||| |||| | | ||||| || | || | |||| Sbjct 20467 TTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGCCTTGAAAGAA 20526 Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342 ||| | || |||| || |||||||| || | ||| |||||| | | || || || Sbjct 20527 CAAATCACCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGACGTCAAAGAC 20586 Query 41343 ATTGATGATTT 41353 ||||||||||| Sbjct 20587 ATTGATGATTT 20597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397451020373140