Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04-
21] 1,028 sequences; 11,708,083 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq10 134 1e-26
seq429 132 4e-26
seq341 129 5e-25
seq157 123 2e-23
seq55 120 3e-22
seq76 113 4e-20
>seq10
Length=230346
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| | ||||| ||| ||||||| || ||||| ||| | ||
Sbjct 8500 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 8559
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || |||||||| ||||| || ||||| || |||
Sbjct 8560 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 8619
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || ||||||||||| || || | ||||| ||||||
Sbjct 8620 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 8679
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || || |||| ||||| ||| | ||| | |||||
Sbjct 8680 ATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8726
>seq429
Length=18768
Score = 132 bits (146), Expect = 4e-26
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
||||| || ||| |||| || ||| | || ||| | ||||| ||| | || ||| | |||
Sbjct 6890 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 6831
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| ||| ||||||||||| ||||| || ||||| || ||||| | ||
Sbjct 6830 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 6771
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || |||||||||||| || ||| | || || ||||||||||||||
Sbjct 6770 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 6711
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || || || || || ||| | ||| | ||||| ||
Sbjct 6710 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 6670
>seq341
Length=201
Score = 129 bits (142), Expect = 5e-25
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053
|| || || |||||||| || || ||| |||| || || || || ||| | |||||| |
Sbjct 3 ATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACT 62
Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113
||||| | |||||| |||||||||||||| ||||| || || || |||||||| |
Sbjct 63 ATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGA 122
Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173
|| || | ||||| || ||| |||||||| || || | || ||||| ||||||||
Sbjct 123 TTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAG 182
Query 27174 AAGGAGTCGACCTTACATT 27192
|| ||||| || || ||||
Sbjct 183 AAAGAGTCTACGTTGCATT 201
>seq157
Length=15234
Score = 123 bits (136), Expect = 2e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || ||| |||| || ||| | || ||| | ||||| ||| | || ||| | |||
Sbjct 819 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 760
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || |||||||| ||||| || ||||| || ||||| | ||
Sbjct 759 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 700
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || |||||||||||| || || | || || |||||||| ||||||
Sbjct 699 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 640
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||||||||| ||| | || | ||||| ||
Sbjct 639 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTAT 599
>seq55
Length=31633
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| || | || || | ||||| ||| | |||
Sbjct 31168 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 31227
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || |||||||||||||| ||||| || || || ||||||
Sbjct 31228 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 31287
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||||| || || | |||||| || || | || |||||||||
Sbjct 31288 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 31347
Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191
||||| |||||||| |||||||||
Sbjct 31348 ATTCAGAAGGAGTCCACCTTACAT 31371
>seq76
Length=15497
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || ||||| || ||| |||| || || || || ||| | ||
Sbjct 72 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 131
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || |||||||||||||| ||||| || || || || ||
Sbjct 132 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 191
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||||| || ||| | ||||| || || | || || |||||
Sbjct 192 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 251
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||||||||| || | || | || ||| | ||| |||||||
Sbjct 252 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGG 298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434912811298560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |