Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04- 21] 1,028 sequences; 11,708,083 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq341 82.4 5e-11 >seq341 Length=201 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/207 (70%), Gaps = 12/207 (6%) Strand=Plus/Plus Query 27794 AAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACCGACG 27853 ||||||| || |||||||| || ||||| ||| || | || || ||| ||||| Sbjct 1 AAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACA 60 Query 27854 ATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCA 27911 | | |||| |||||| ||||| ||||| |||||| |||| || || || Sbjct 61 CTATTGACAAC--GTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACA 118 Query 27912 ACGGTTAATTTTTGCCGGAAAACAATTGGACGAC----GAACGCAGCTTGTCCGATTACA 27967 | | || ||||||||||| || ||| |||| ||| |||||| |||| ||||| | Sbjct 119 AAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGC----TGTCTGATTATA 174 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATT 27994 |||| || |||||| || ||||||| Sbjct 175 ACATTCAGAAAGAGTCTACGTTGCATT 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355857941488956