Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04- 21] 1,028 sequences; 11,708,083 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq76 154 3e-32 seq55 152 1e-31 seq429 140 8e-28 seq10 138 3e-27 seq157 134 3e-26 seq341 127 5e-24 seq420 89.7 1e-12 >seq76 Length=15497 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||||||||||||||||||||| ||||| || || || |||| || || || |||||||| Sbjct 281 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 222 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || || || || | | ||| ||||| ||||||| ||||||||||| || Sbjct 221 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 162 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 || || || ||||| || || |||||||| ||||||||| || || || ||||| Sbjct 161 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 102 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| | ||||| Sbjct 101 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 72 >seq55 Length=31633 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||||||| || || ||||||||||| || || | | ||| || || ||||| ||||| Sbjct 31599 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 31540 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| | | ||||| || ||||| | ||||||||||||||||| || Sbjct 31539 CTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTT 31480 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||| ||||| ||| ||||||||| | |||||| || || || || Sbjct 31479 CGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGT 31420 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| ||||| | |||||| Sbjct 31419 CAAAGTCTTAACAAAGATCTGCAT 31396 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || ||||| ||||| || | |||||||| || || ||||| ||||| | || || || Sbjct 31385 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 31326 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||| |||||||| || || ||||| | | |||||| || ||||| | |||||| Sbjct 31325 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 31266 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || || || || ||||| |||||||| || || |||||| || | || Sbjct 31265 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 31206 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | |||||| || || | |||||| Sbjct 31205 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31168 >seq429 Length=18768 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || || Sbjct 6684 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 6743 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 6744 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 6803 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || |||||| || || || || || |||||||| |||||| || | |||||| Sbjct 6804 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 6863 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| ||||| Sbjct 6864 GGTCTTACCAGTCAAAGTCTTGACAAA 6890 >seq10 Length=230346 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| ||||| || || ||||||||||| || || | | || || || Sbjct 8715 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 8656 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| |||| |||||||| Sbjct 8655 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 8596 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || || |||||||| |||||| || || || || Sbjct 8595 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 8536 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| || || | ||||| || Sbjct 8535 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8497 >seq157 Length=15234 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | || | |||||| || ||||||||||| || || | || || || || Sbjct 613 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 672 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 673 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 732 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || ||||||||||| |||||| || | |||||| Sbjct 733 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 792 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| || || Sbjct 793 GGTCTTACCAGTCAAAGTCTTAACGAA 819 >seq341 Length=201 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || |||||||| || ||||||||||| | || || || || |||||||| ||||| || Sbjct 193 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 134 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | | |||||| || ||||||| ||||||||||| || || || ||| Sbjct 133 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 74 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| || || ||||| || ||||||||| || || || ||||| || || ||||| Sbjct 73 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 14 Query 211098 TTTACAAA 211105 || || || Sbjct 13 TTGACGAA 6 >seq420 Length=183 Score = 89.7 bits (98), Expect = 1e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||||||| || || ||||||||||| || || | | ||| || |||||||| || || Sbjct 149 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTG 90 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || || || | | ||||| || ||||| | ||||| || || || ||||| Sbjct 89 CTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTT 30 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGA 211057 ||| ||||| || || ||||| || Sbjct 29 ACTTTTGACGTTGTCAATAGTGTCGGA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159136732519220