Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04- 21] 1,028 sequences; 11,708,083 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq891 131 2e-25 >seq891 Length=41648 Score = 131 bits (144), Expect = 2e-25 Identities = 379/577 (66%), Gaps = 15/577 (3%) Strand=Plus/Plus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 ||||| || |||||||| || || | ||||| || |||| |||||||| || ||| Sbjct 23208 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 23267 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || ||||| || ||||| | |||| ||||| | ||| || || | ||||| || ||| Sbjct 23268 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 23327 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || || || | ||| |||| | |||||||| || || | | |||||| || | | Sbjct 23328 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 23387 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----ATTGT 23735 || ||||||| || | ||| | |||||| | || | | || || Sbjct 23388 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGGT 23443 Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAG 23795 | ||| || || || | || |||||| | || | || || ||||| || | Sbjct 23444 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCAA 23503 Query 23796 TAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCT 23855 || || ||||||| |||||||||||||| || || || || || |||| | Sbjct 23504 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 23563 Query 23856 AGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACC 23915 || || | | ||| || || | | || ||| | | || ||||| ||||||||||| Sbjct 23564 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 23623 Query 23916 ATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT--TTCATCAGTTG 23971 ||| ||| || || || |||||||| || ||||| ||| ||| || ||| Sbjct 23624 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTC-TC-GTTC 23681 Query 23972 ATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 || | || ||||| |||| ||||| || || ||||||| ||| ||| | ||||| ||| Sbjct 23682 ATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 23741 Query 24031 CTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 || ||||||||| || | |||| || |||| Sbjct 23742 GAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 23778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521481298879200