Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 214 2e-50 seq10 196 4e-45 seq6 185 8e-42 seq12 93.3 4e-14 seq11 91.5 1e-13 >seq5 Length=401362 Score = 214 bits (236), Expect = 2e-50 Identities = 430/638 (67%), Gaps = 0/638 (0%) Strand=Plus/Plus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 ||| || || |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 212967 TTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACG 213026 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | || || || || ||||| | | ||| | |||||| || | ||| |||||||| Sbjct 213027 AATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCA 213086 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 ||||| | | ||| |||||| || || |||||||| || || || || || |||||||| Sbjct 213087 TGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACG 213146 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 || ||||||||| | || | | ||| || | | ||||| || | ||| || Sbjct 213147 TGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACC 213206 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | | || ||| | | |||| |||| | || | ||| | || || | | Sbjct 213207 TGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGT 213266 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| || || | ||||| ||||||||| || || || ||| ||| || || Sbjct 213267 CTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTT 213326 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || | || |||||| ||||||||||| | | |||||| |||| || ||||| Sbjct 213327 CATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGT 213386 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 ||| ||||| || ||||||| |||||| | ||||| || | | ||| || Sbjct 213387 GGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTC 213446 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 || || ||||| ||||| | ||| || ||||| | || | ||| || | ||| | Sbjct 213447 GATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTCGGC 213506 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | | |||| | | | | ||| || ||||||| || || ||||| ||||||||| Sbjct 213507 CACTTCACCGTCTAGTCTTAGCAGGTAGGAACGTTCCAGAGTCTTAAACCCAAAATAGGT 213566 Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 || || || || | |||| ||| |||||||| |||| Sbjct 213567 GTACTTGAAATCTCTGTCGTACACGATGGCCGAGTTCA 213604 >seq10 Length=747934 Score = 196 bits (216), Expect = 4e-45 Identities = 420/615 (68%), Gaps = 16/615 (3%) Strand=Plus/Plus Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 || || |||||||| ||||| |||||||| ||||| || |||||||| || |||| | | Sbjct 387181 GCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAAAACTTGGTCGA--GAATTTCTCCA 387238 Query 57756 --GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813 || || || | |||| || | | || ||||| || ||| | || || |||||| Sbjct 387239 CCGAGGTCCAGATCCCGGAAGCCAAGAGTTTCTACGGTTTCCAAATCGCTATCGAAAACA 387298 Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAA 57871 | ||||| |||| || || | | |||||||| ||| | ||||| ||| | || || Sbjct 387299 TTCATTCCGAAACCTACTCCTTGTTGATCGATACCTACATCAAGGATCCAAAG--GA-AA 387355 Query 57872 ACGTAGACT-GTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGT 57930 | | || ||||||||| ||||| || || || | || | ||||||| || ||| Sbjct 387356 GTGAATTCTTGTTCAACGCCATCGACACCATCCCAGAAATTTGCGAGAAGGCCGAATGGG 387415 Query 57931 CAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCG 57990 | | | |||||| || ||| || ||||| || || ||| |||| |||||| Sbjct 387416 CCCTTAGATGGATCCAAGACGCAGACGCGCTGTTCGGTGAAAGACTAGTCGCCTTCGCCT 387475 Query 57991 CCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCG 58050 || |||||||| | ||||| || || ||| || | || || ||| ||||||| | | Sbjct 387476 CCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAGAGAG 387535 Query 58051 GCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATA 58110 | |||||||||| |||| || |||||||||||| | | ||||| ||| | || | Sbjct 387536 GTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTGCACA 387595 Query 58111 CTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC-GACGC-GGGATCGCAT 58168 | || ||||| || | ||| | | || | || || || ||| | | |||| | Sbjct 387596 CCGACTTTGCCTGTTTGTTGTTCGCCCATTTGAAGAACAAGCCGGACCCAGCCATCG--T 387653 Query 58169 CTTGGACATTATCACCGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTAC 58227 | | | || |||||||||| |||| ||||||| || || | || || ||| | | Sbjct 387654 CGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGA-TACTTCCTAGACGCCTTGC 387712 Query 58228 CGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCG 58287 | || ||| |||| |||||||| || |||||| ||||| | ||||| || || | Sbjct 387713 CAGTCGCCTTGCTAGGTATGAATGCCGACTTGATGAACCAGTACGTCGAGTTCGTCGCAG 387772 Query 58288 ACAGACTTTTGCTCG 58302 ||||||| ||| ||| Sbjct 387773 ACAGACTGTTGGTCG 387787 >seq6 Length=588913 Score = 185 bits (204), Expect = 8e-42 Identities = 459/693 (66%), Gaps = 8/693 (1%) Strand=Plus/Minus Query 23264 GCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC--GGGCGATTGCATCGGACACATGA 23321 || || ||||| ||||||||||||| || ||| |||| || | ||| | | | Sbjct 303057 GCTTCGAATTCATCACCGTAACAGTCACTCAAGCCTGGGGCAGATG--TAGGAGAGAATA 303000 Query 23322 GACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGT 23381 | |||| | || | ||| || || |||| |||||||| || | ||||||||| Sbjct 302999 AAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGCTG 302940 Query 23382 AGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGT 23441 ||| | || | || || | || || || ||| |||||| | | || | |||| Sbjct 302939 GGAATAAATCTCTTGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGT 302880 Query 23442 CCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGC 23501 | || | || || ||||| ||||| | || | |||||| || || |||||||| || | Sbjct 302879 CGAAGATATCAGCGTGCCATGGCTCCAAATATAGGGCAAAGGCACCAGGTCTCTTGTTAC 302820 Query 23502 CGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGT 23561 | || || || || |||||||| || |||||| | || | | ||| || | | |||| Sbjct 302819 CACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCCGT 302760 Query 23562 TGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGA 23621 | || | ||| | || || | || || |||| |||| |||||| | || | Sbjct 302759 TAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATGTA 302700 Query 23622 AACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGC 23681 ||| || ||||| | | ||| || |||| || |||| |||| ||| ||||| || | Sbjct 302699 GACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATAC 302640 Query 23682 CCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCG 23741 | || ||| || || || | || || |||||||| || |||||||| | || || | Sbjct 302639 CTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAG 302580 Query 23742 TAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGT 23801 || | || ||| | || || ||| || ||||||||| ||||||| || | Sbjct 302579 TACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTAT 302520 Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCA 23861 | || || | ||||| ||||||| || ||||| ||||| | |||||| | ||| || | Sbjct 302519 AGGTTTCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATTA 302460 Query 23862 TGTATTGAGGTC--TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCAT 23919 || || || | || | | ||| ||||| ||| | || | || ||||||| || Sbjct 302459 AGTGCTGTGGACGTTCAGCAACTTGA--CCGTTGATTCTCAATAAGTAAGAACGTTCCAA 302402 Query 23920 CGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952 ||||| || || || || ||| | |||||| Sbjct 302401 AGTTTTGAAACCGAAGTAACTATACTGAAAGTC 302369 >seq12 Length=1033978 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| | || || || || || ||| | || |||||| | Sbjct 476168 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 476227 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | ||||| | || ||||||||||| | || || ||| Sbjct 476228 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 476287 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || || ||||| || || ||||||||| | ||| || || || Sbjct 476288 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 476347 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| || || ||| | || |||| | ||| |||| || ||| Sbjct 476348 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGGT 476398 >seq11 Length=632881 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| |||||| |||| || || || ||||| | || |||||| | || |||| | Sbjct 600765 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 600706 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | |||||| | || ||||| ||||| | || || ||||| || | | Sbjct 600705 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 600646 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || ||||| || || ||||||||| || || || ||| || ||||||||||| Sbjct 600645 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 600586 Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||| | ||| | || | ||| |||| || |||| Sbjct 600585 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTA 600546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766266270080