Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10 122 2e-22 seq5 84.2 4e-11 >seq10 Length=747934 Score = 122 bits (134), Expect = 2e-22 Identities = 271/402 (67%), Gaps = 15/402 (4%) Strand=Plus/Plus Query 101960 TTCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAAT 102019 ||||| ||||| |||||| | ||||| || ||||| |||| || | |||| |||||| Sbjct 387505 TTCGCCTCCATCTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAAC 387564 Query 102020 GAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAG 102079 ||||| || | || ||||||||| | || ||||||||| || || |||| | Sbjct 387565 GAGTTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGCCCA- 387623 Query 102080 GGTTTTGTTGATA---CCCCATCAAGAGAAAGGATTCTTGAAATT-GTCACTGAAGCCGT 102135 |||| || || | | || | | || |||| | ||||| || ||||| Sbjct 387624 ---TTTGAAGAACAAGCCGGACCCAGCCATCG---TCGAGAAAATCGTCACCGAGGCCGT 387677 Query 102136 CCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTG 102195 | || |||||| || || || || |||| || || | || ||||| Sbjct 387678 CGAGATCGAACAAAGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAATGC 387737 Query 102196 CAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--A 102253 | | ||||||| ||||||| | || || || ||||| | ||| ||||| | | || | Sbjct 387738 CGACTTGATGAACCAGTACGTCGAGTTCGTCGCAGACAGACTGTTGGTCGCCTTCGGTAA 387797 Query 102254 CTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAG 102313 | |||| | |||| || || |||||||||| |||||||| || |||||| | | Sbjct 387798 CAAGAA--GTACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCC 387855 Query 102314 AATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 |||||||||||| || |||||||||||| |||| || ||| Sbjct 387856 GGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGACTACCAA 387897 >seq5 Length=401362 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || || ||||||||||| || || || ||| || | ||| || |||||||| |||||| Sbjct 213256 CCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATG 213315 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910 || || | | | | | ||||| || || || | ||| || |||| | || || Sbjct 213316 GAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGC-GTACCGGC 213374 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 |||||| |||||||||||||| ||||| || || | |||||| | | || || | Sbjct 213375 ATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTT 213434 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 | || || | ||| || |||||||| || | ||||||||||| Sbjct 213435 CAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCAT 213482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583695702920