Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq6 194 2e-44 seq5 123 2e-23 >seq6 Length=588913 Score = 194 bits (214), Expect = 2e-44 Identities = 516/781 (66%), Gaps = 13/781 (2%) Strand=Plus/Minus Query 36796 GTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGC 36855 ||||||| |||| | || || | || |||||||| ||||||||| || || ||||| Sbjct 304215 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTCTTTAGA 304156 Query 36856 CCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATA 36915 ||| |||| ||||| ||||||||||| || || || | || || | | Sbjct 304155 CCCTTCTTCCAGCCGTAGAAATGCATACTTGTTAGCTTACCCATAGTTGGGGCACGCAAG 304096 Query 36916 TATATTGTCATTGATTGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTA 36973 ||| ||| || ||| ||| || || ||| | | | |||||||||||| | | Sbjct 304095 AATAAATTCAAAGAGTGAGATTGGTCGATGTAAATGG--CACGGTCGGCTGCCATGTTAA 304038 Query 36974 AAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTA 37033 || ||||| || || |||||||| |||||||| | | ||| | | | ||| | Sbjct 304037 TGATTGTCTTTTGTGAAATTTCCCAAACAGTTTTATACAAATCTTTCAATTCTTGTGGCA 303978 Query 37034 AATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATGTCATTA 37089 || | ||| |||||| |||||||| ||| | | |||| ||| || ||| | Sbjct 303977 CATTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATACCATCA 303919 Query 37090 TTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCT 37149 | ||| ||| | | | || | ||| | || |||||| || || ||||| || Sbjct 303918 TCCCAAATACCCAAATCGACCAAATCACGCAACAAGTATGGATTGACGACTTGAAATTCA 303859 Query 37150 CCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTA 37209 ||||||| || | | | ||| || ||| |||| |||||| | |||| || | | Sbjct 303858 CCAGATAGGACACGACGAGAATACATGTTGGAAGTAACTGGTTCGAAACACTCGTTGTAA 303799 Query 37210 CTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCA 37267 | ||| || |||||||| |||||||||||||| ||||| || | ||| | |||| | Sbjct 303798 CCTAAGATCTGAGATGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGT--TTCTAA 303741 Query 37268 ATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCT 37327 ||||| | || | ||| | || | ||||||||| | | | ||| || | Sbjct 303740 TACCATGCTCCATGATGTTATTTCTCAGAGTGTCCCAATCCCACATACCGTATGGTTTTT 303681 Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 |||||| || |||| || ||||||| | || || || | ||| | || || | Sbjct 303680 GGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCCGGGGAGCCTTTAAAGGTTTCGT 303621 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | || || | ||| ||||| ||| ||| || ||| | | ||||| || || |||| Sbjct 303620 ATGGGCCATCTCTTTGAGCTAATTCACAAGAAGCTTCCATGGAGGCATGGTAGATAGTTT 303561 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATA 37507 |||| ||||| ||||||| || ||||||||| ||||||| | | ||| || | Sbjct 303560 CGAAGATTTGAATATTTAGTAAGCGTGCTTCTTCTGAGTCGAATGGCAAACGCAACAACA 303501 Query 37508 TAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATC 37567 | || ||||||||||| || ||||| | | | || || |||||| || ||||||||| Sbjct 303500 TGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTATGTCTCATATTAGATC 303441 Query 37568 T 37568 | Sbjct 303440 T 303440 Score = 165 bits (182), Expect = 8e-36 Identities = 416/629 (66%), Gaps = 10/629 (2%) Strand=Plus/Minus Query 38010 TTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGT 38069 || ||| || || | ||| || | ||| || ||||||| || | ||||||||| | | Sbjct 302983 TTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGCTGGGAATAAATCTCTTGC 302924 Query 38070 TCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTG 38129 | |||||| || || ||||||||| | | | || ||||| ||||||||||| Sbjct 302923 ACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTG 302864 Query 38130 CCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATA 38189 |||||| || | ||| | | | || || ||||| || | ||| || || | || ||| Sbjct 302863 CCATGGCTCCAAATATAGGGCAAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACATA 302804 Query 38190 TCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTAT 38249 | | || || || | | | | |||||| | || || ||||| | |||||| | Sbjct 302803 ACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTTGT 302744 Query 38250 ACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGC 38309 ||| | || |||| || | || || || || || | || || || || || Sbjct 302743 ACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATGTAGACCAATACCTCCAGC 302684 Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATC 38369 | ||| || || ||||| |||| || || ||||| | |||||||| || ||||| Sbjct 302683 AGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACCTTCAATGGAATCATC 302624 Query 38370 CTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAA 38429 ||| |||| | || ||||| |||||||||||| |||||| || ||||| ||||| Sbjct 302623 CTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAGTACCAGCGTTGAATAA 302564 Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489 || ||||| ||||| | || ||||| |||| | ||||| ||||||| | | Sbjct 302563 AGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATAGGTTTCTAAAGCGGC 302504 Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || || | | |||||||||||||| | || ||||| | | || ||||| | ||| Sbjct 302503 CTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATTAAGTGCTGTGGACGTTC 302444 Query 38550 TATTATTTTA----TTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 | || | | ||||| |||||| ||| ||| || ||||| | || | Sbjct 302443 AGCAACTTGACCGTTGATTCTCAATAAGTAAGAACG----TTCCAAAGTTTTGAAACCGA 302388 Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633 | |||||||| |||| | ||||| || || Sbjct 302387 AGTAACTATACTGAA-AGTCTCTGTCATA 302360 >seq5 Length=401362 Score = 123 bits (136), Expect = 2e-23 Identities = 1109/1779 (62%), Gaps = 68/1779 (4%) Strand=Plus/Plus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 || || | || |||||||| || ||||| || || || | ||| |||| ||||| Sbjct 211750 GAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCTTCAAACCCTTCTTCCAACCGTAG 211809 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATC-TATATATATTGTCATTGATTG 36932 ||||||||||| || | |||| | || | | | || || | | ||| || || Sbjct 211810 AAATGCATACTTGTAA-TTTTACCCATTGATGGTGATTGTAGGAACAAATTCAAGGAGTG 211868 Query 36933 ACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGAT 36990 |||||| || ||| | | | | | || ||||| | | |||| |||||||| Sbjct 211869 GGATTGATCAATGTAAATGGAACGAT--CAGCAGCCATGTTGATAATAGTCTTTTGAGAG 211926 Query 36991 ATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGA 37047 || ||||| || |||||||||| | ||| | || | || | | | |||| || | Sbjct 211927 ATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTGAGGAACGTTTGGTAAATCTTTA 211986 Query 37048 ATAGAACCATTATG--TAA-CACA-ATTGTATTCTTTATGTCATTATTCCACATATTTCT 37103 || |||||||| || ||| || | ||||| ||| | | |||| | || || | Sbjct 211987 ATGGAACCATTTTGAGTAATCAAATATTGT-TTCATACTATCAT-----CCCAAATGCCC 212040 Query 37104 ACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACT 37161 | | | || || | | || || |||||| || || || || || |||||||| || Sbjct 212041 AGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTTGGAATTCACCAGATAAGACA 212100 Query 37162 CTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGA 37221 | | | || || || ||| |||||| | ||||||| | | | ||||| Sbjct 212101 CGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACTCATTGTACCCAAGAATTTGG 212160 Query 37222 GATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTAT 37279 ||||| || || || |||||||| || || | ||| | |||| || |||||| | Sbjct 212161 GATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT--TTCTTAACCCATGTTTCA 212218 Query 37280 TAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACAT 37337 ||| ||| || | | ||||||||| | | ||| || | || |||||| Sbjct 212219 CAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATGGCTTAGCATT--CCACAT 212276 Query 37338 ATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTA 37397 || | |||| |||||| ||| || ||||| | | | | || ||| || | Sbjct 212277 GTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTTC 212336 Query 37398 AATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTG 37457 ||| ||||| || ||| || ||| || | |||| || || |||||||||||||| Sbjct 212337 CTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAATAGTTTCGAAAATTTG 212396 Query 37458 TATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA--ATAATATAAACACA 37515 | |||| | ||||| |||| ||| | || |||| | | || || |||||| | Sbjct 212397 TTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAA--GTA 212454 Query 37516 TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGAC 37572 || |||||||| ||||| || | | || |||||||||||| | ||||| ||||| | Sbjct 212455 TCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGTTAGAGTTTCTAGCC 212514 Query 37573 GATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATT 37632 ||| |||||||||||| || || || | | |||| | || | | | | | Sbjct 212515 ---TCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTATGAGTGATGACT 212571 Query 37633 TTCGTAAT-TATTCTCAACTTGTCGAACAT-AAATACGTTATTATTAACAAATT-----T 37685 || | ||| | | | ||||| | ||| | | || || ||| || || Sbjct 212572 TTAGCAATGTCATGTAAACTT-TGGAAATTGTAGGTCGCCGTT-TTACCATCTTCCGAAG 212629 Query 37686 ACTCAACGA-------------AATAGATCCTAGATTACATACAGCAACTTCATCTTCGT 37732 |||||||| ||| || ||| |||||| |||||| ||||||| | Sbjct 212630 TCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGG 212689 Query 37733 TACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTT 37792 | | | | | || || ||| | || |||| | || || |||| || || Sbjct 212690 AAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTTTGTT 212749 Query 37793 GATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTT 37852 | |||| ||| | ||||| | ||| ||||| | || | || || || |||| ||| Sbjct 212750 GGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTT 212809 Query 37853 GAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--Attttttt 37910 | || | | || | | ||||| || || || ||| | |||| | || Sbjct 212810 GTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTT---GATGGTTTTACCACGACCTT 212866 Query 37911 CTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCC 37970 | | ||||||| |||||| | | || || | ||||| || ||| || || Sbjct 212867 C--TCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACC 212924 Query 37971 TGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAA 38030 ||| | | ||| | | || | ||| | |||| | ||| || || | ||| || Sbjct 212925 TGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAA 212984 Query 38031 TAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTAC 38090 | ||| || | ||||| |||| || |||||| | | | | |||||| || || Sbjct 212985 AAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATG 213044 Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150 | ||||||| | | ||| ||||| || || || |||||||| || | ||| | Sbjct 213045 AGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGC 213104 Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210 | || || ||||| || | ||| || || | | || | | ||||| || | | Sbjct 213105 AAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGAC 213164 Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270 | | ||| || | | || || || | ||||| |||| | ||||||| || | Sbjct 213165 ACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGT 213224 Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330 | || ||||| | || | || | ||||||||| || || || | || || Sbjct 213225 GGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACA 213284 Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390 | ||| || || || | |||||||| || ||| ||||| || | | | ||||| Sbjct 213285 CTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACA 213344 Query 38391 ACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 | |||||||||||| ||| || ||||| ||||||| ||| || || || || |||| Sbjct 213345 AGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAA 213404 Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510 || | ||||| | || || || | | || || ||||| | ||||||||| Sbjct 213405 GTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAAT 213464 Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 |||||| | || | ||| | || |||||| || | ||| Sbjct 213465 ACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTC 213503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524659442560