Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq9 104 3e-17 seq4 87.8 2e-12 >seq9 Length=813827 Score = 104 bits (114), Expect = 3e-17 Identities = 364/567 (64%), Gaps = 35/567 (6%) Strand=Plus/Plus Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATC 6758 ||| |||||||| || ||| | ||| |||||||| || ||||| ||| | |||| || Sbjct 241427 TGGGTGAGGATTGTAGTCTTCAATTTCGAAATCTTCTAACTTAAAGTCA--TCAATT-TC 241483 Query 6759 AGACttttt--ttttAATATTACAACAGGTGAAGGTTTTATTGATCGAGTTAA--TTGTT 6814 | | | ||||||| || | || ||| | | | | |||| | || ||||| Sbjct 241484 TGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCT-TGGATCTCTTGAAATTTGTT 241542 Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874 | || | || | |||||||| ||| | ||| ||||| || | |||||||| || | Sbjct 241543 CATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGTATGAATGAACT 241602 Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934 |||| |||| ||||||||| ||| ||| || | || | || ||||| || || | Sbjct 241603 CACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGCATATGAGGCGA 241662 Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATA--ACA------------ 6980 |||||| || ||||| | |||||||| || | ||| || ||| Sbjct 241663 TATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAACAAGCACGAAAGGC 241722 Query 6981 ----TTGACAAGATAAAATATTGTCTATAG---------CATAAAATTGACACAATACAT 7027 || || | | | | ||| | | |||||||||| | || | | Sbjct 241723 GAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTGTGAAAAAATGT 241782 Query 7028 GACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATAC 7087 | ||||| ||||| | || || | ||| | || |||||||| |||| | || | Sbjct 241783 GGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCTCATGATGATTC 241842 Query 7088 GTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCT 7147 |||||||| || ||||| |||||||| ||||| | | ||||| ||||| | Sbjct 241843 TTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTGATCGATACCTT 241902 Query 7148 GACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACC 7207 | || ||| | | | || | | || || || ||||||||||||||||| |||| Sbjct 241903 GTCCGGTATAGTCATCGTCGCAGGTCTTGTATTTGGCACCAAAATGTCTCCATTGGAACC 241962 Query 7208 CATAAATAGGACCTAAATCACCTTCTT 7234 |||||| |||||| | ||| ||| ||| Sbjct 241963 CATAAACAGGACCCAGATCCCCTACTT 241989 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421 |||| ||||| || || |||||| | || |||||| || || |||||| | |||| Sbjct 382238 AAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACATATC 382179 Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481 || |||||||||||| ||||| ||| ||||| || || ||| | ||||| || || | Sbjct 382178 GTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTTCCAGATTTAATTATCAATCCTC 382119 Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503 ||||| ||||| ||| ||||| Sbjct 382118 ATGCTATTCCATCTCGTATGAC 382097 >seq4 Length=982538 Score = 87.8 bits (96), Expect = 2e-12 Identities = 252/385 (65%), Gaps = 16/385 (4%) Strand=Plus/Minus Query 164605 AAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTT 164664 || |||||||| ||||||||| | || | || ||||| ||| ||||||| || | Sbjct 568703 AAGATTGTTAACGGTCCTGAAGTTTTAAGTAAGTATGTTGGTTCCTCAGAAGAAAACATC 568644 Query 164665 AGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGA--AAGCAGGTTTAGCTAGTAAAT 164722 | || || || | || || |||| |||| | ||| ||| || | | | | Sbjct 568643 CGTAATTTATTCAAAGACGCAGAAGCAGAATACAAGGCCAAGGGGGATGAATC--TTCCT 568586 Query 164723 TACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAA---------ACGTGGTG 164773 ||||| | || |||||||||| | ||| || ||| ||| | | | |||| Sbjct 568585 TACATATCATCATTTTTGATGAACTGGATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTG 568526 Query 164774 ATAATATTATTCATGATG-CAGTG--GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAG 164830 || || | | | || || || |||||||| ||||| ||||||| || ||||| | Sbjct 568525 ATGGTACTGGTGTAGGTGACAATGTAGTTAATCAATTGCTGGCTAAAATGGACGGTGTTG 568466 Query 164831 AATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATG 164890 | | |||||||| || | | |||||||||||||| ||||| || ||| || Sbjct 568465 ATCAACTGAATAATATATTGGTCATTGGTATGACCAACCGTAAAGATTTGATCGATATTG 568406 Query 164891 CTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAG 164950 || | ||||| || ||| |||| ||| | | | ||||| ||||| ||| || ||| Sbjct 568405 CTCTTTTACGTCCAGGTAGATTCGAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAG 568346 Query 164951 GACGCCTTCAAATTTTAAAAGTTCA 164975 | | || || ||||| || |||| Sbjct 568345 GTAGACTGCAGATTTTTGAAATTCA 568321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871821238400