Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq11 134 1e-26 seq12 125 6e-24 seq5 125 6e-24 >seq11 Length=632881 Score = 134 bits (148), Expect = 1e-26 Identities = 164/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| ||||| ||||||| | ||||| || || |||||||| || Sbjct 600765 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 600706 Query 25068 GAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || || | || | ||| ||||||||||| || |||||||||||||| | Sbjct 600705 GA--CAATGTCAAATCCAAGATTCAA-GACAAAGAAGGTATCCCACCTGACCAACAAAGA 600649 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || || ||||| ||||| | | | || || ||| ||||| |||||| Sbjct 600648 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAA 600589 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| |||||||||| | || | ||||| || Sbjct 600588 AAGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 600548 >seq12 Length=1033978 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 25017 ACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG 25076 |||||||||||||| |||| || | || || ||||| |||||||| ||||| | Sbjct 67273 ACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCTGACACGATCGACAACGTC 67214 Query 25077 AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGC 25135 ||| | || | ||| ||||| ||||| ||||| || |||||||| | | |||||||| Sbjct 67213 AAGTCCAAGATTCA-AGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGC 67155 Query 25136 CGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCAC 25195 || || || || || |||| | | ||| || || || || |||||||| || ||||| Sbjct 67154 TGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCGGACTATAACATTCAAAAGGAGTCCAC 67095 Query 25196 GCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || || || ||||| |||||||| || ||||| Sbjct 67094 TCTGCACTTGGTCCTAAGACTAAGAGGTGGCAATTA 67059 Score = 114 bits (126), Expect = 1e-20 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||||| |||||||| | || || | ||||| || || || Sbjct 476171 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 476230 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || ||| | || | ||| ||||| ||||| |||||||||||| Sbjct 476231 GACACTATTGA--CAATGTCAAGTCTAAGATTCAA-GACAAGGAAGGTATTCCACCTGAC 476287 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||| ||||| | | ||| || || ||| Sbjct 476288 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 476347 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || ||||| |||| || || | || | ||||| || Sbjct 476348 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 476397 >seq5 Length=401362 Score = 125 bits (138), Expect = 6e-24 Identities = 163/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| || |||||||| ||||| ||||||| | ||||| || || |||||||| || Sbjct 47461 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 47520 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| |||| | ||| ||||| ||||| || || ||||||||||| | Sbjct 47521 GA--CAATGTCAAGTCAAAGATTCAA-GACAAGGAAGGTATCCCTCCTGACCAACAAAGA 47577 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || || ||||| ||||| | | | || || || |||||||| ||| Sbjct 47578 TTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAA 47637 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| |||||||||| | || | ||||| || Sbjct 47638 AAGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGG 47678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327873251560