Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq6 134 1e-26 seq5 105 7e-18 >seq6 Length=588913 Score = 134 bits (148), Expect = 1e-26 Identities = 474/732 (65%), Gaps = 19/732 (3%) Strand=Plus/Plus Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966 |||||||| || || || ||| || ||||| || |||||| | | | | |||| Sbjct 302567 TTCAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGAT 302626 Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026 || ||||| || |||| ||| | | ||||| ||||| || || ||| || Sbjct 302627 GATTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCT 302686 Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086 || || || || | | ||||| || | ||||| | || || ||||| ||||| Sbjct 302687 GGAGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACA 302746 Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146 || || || || ||||| | | |||||| |||| ||||||||||| | || || || Sbjct 302747 AACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTAT 302806 Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCAC 94206 || ||||| |||||| | ||| ||| | || || | ||| | ||||| |||||| Sbjct 302807 GTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTTGCCCTATATTTGGAGCCATGGCAC 302866 Query 94207 GCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GG 94263 || || | | ||||||||| | ||||||| ||||| || || || | | Sbjct 302867 GCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGA---AGAAATCCGT 302923 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 || ||||| | ||| ||||| ||||| ||||| ||||| ||||| || ||||| || Sbjct 302924 GCAAGAGATTTATTCCCAGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAA 302983 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTCCGACGTTTGTG 94381 ||| | | |||| |||| || || || | || ||| || || ||| || | Sbjct 302984 AACGGCACTTGGA--CTTTATTCTCTCCTACATCTGCCCCAGGCTTGAGTGACTGTTACG 303041 Query 94382 GATCGCGTTTTGAAGACTTGTATGCTCGTTACG-AATCGCAGGGCAAGGCCAGGAAGGTT 94440 | || |||| | | ||| | ||||||| || | ||| | | | ||| | Sbjct 303042 GTGATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTG----GTAAGACT 303097 Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500 || | || || | ||| | ||| |||| | ||| ||| || ||||| || Sbjct 303098 ATCAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACC- 303156 Query 94501 TACATCTTGTT--CAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGA 94558 | | ||||| |||||| || ||| || |||||||| || || | || || | Sbjct 303157 -ATTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTA 303215 Query 94559 TCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTG 94618 ||||| || ||| ||||| || ||||| || || || |||| || |||| ||||| Sbjct 303216 TCAAGTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTG 303275 Query 94619 TGTGTAACCTGG 94630 | |||||| ||| Sbjct 303276 TTTGTAACTTGG 303287 >seq5 Length=401362 Score = 105 bits (116), Expect = 7e-18 Identities = 471/737 (64%), Gaps = 17/737 (2%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || || || || || || || || || |||||||| ||||||||||| Sbjct 213391 CCCCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTG 213332 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||||||||| || |||| ||||| | || || ||||| | || | Sbjct 213331 CCATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTT 213272 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || || || || | || | | || || | | ||| ||| || || || | Sbjct 213271 CCAAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATA 213212 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | |||||||| || || || ||||| | | || ||| |||| |||||||||||| Sbjct 213211 TTGCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACA 213152 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || ||||||||||| |||||| | ||| ||| | || || | | | | Sbjct 213151 CTGCACGTTACGTGGACCAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGG 213092 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| ||||| || ||| | | || |||| | |||||| || || || || Sbjct 213091 AGCCATGGCATGCAGACATCTTCGACTTTGTCGATATCAGAAAGACTCATGGTAAGGA-- 213034 Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 || | | || ||||| | ||| ||||| ||| | || || ||||| ||||| | Sbjct 213033 -AGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCCGATCTTTTCATGAAGC 212975 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTC 94370 | ||||| | | ||||||| | || || || |||| || ||| || || Sbjct 212974 GTGTCGAAGAGGATGGGGCCTGGA--CCTTATTCTCACCAAGTGCTGCCCCAGGTTTGGA 212917 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 ||||||||| || || ||||| | ||| | ||||||||| || | | | | Sbjct 212916 CGACGTTTGGGGTGAAGAATTCGAAGAGCTATATACCCGTTACGAA----AGAGAAGGTC 212861 Query 94431 CAGG-AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 || || || | ||| ||| | ||| | ||| || | | ||| || | Sbjct 212860 GTGGTAAAACCATCAAGGCTCAAAAGGTATGGTACGCCATCTTGCAAGCACAAACAGAAA 212801 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 | ||||| |||| ||| | | ||||| |||| ||| ||| ||||||| || || Sbjct 212800 CCGGTACACCCTTCATGGTTTATAAGGATGCCTGT-AACAGAAAGACCAACCAACAAAAC 212742 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 || || ||||| || || |||| ||| || ||||||||| |||| || || Sbjct 212741 CTGGGTACCATCAAATCGTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGAT 212682 Query 94609 GAGATTGCTGTGTGTAA 94625 || | |||||| ||||| Sbjct 212681 GAAACTGCTGTTTGTAA 212665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723051583040