Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq6 149 3e-31 seq5 120 2e-22 >seq6 Length=588913 Score = 149 bits (164), Expect = 3e-31 Identities = 318/473 (67%), Gaps = 4/473 (1%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||| |||||||| |||| | |||| || || || ||| || | |||||||| | Sbjct 303009 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACC 302950 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | || ||||||||||| || | |||||||| || |||||||||||| | | Sbjct 302949 CATAGAGCTGGGAATAAATCTCTTGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATG 302890 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | ||| || || ||||| | ||||||||| || ||||| | ||||| ||| | Sbjct 302889 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGGGCAAAGGCACCAGGT 302830 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 || || |||||||| || || || | ||||| | ||||| || | ||| ||| Sbjct 302829 CTCTTGTTACCACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGA 302770 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191 | ||| || | ||| |||||||| | | ||| | || || || | | ||| | | Sbjct 302769 ATTAACCCGTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 302710 Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTG 26249 || ||| | ||| || || ||||| ||| ||||| ||||| || | ||| | Sbjct 302709 TGGATATGTAGACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAA--G 302652 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 ||||| |||| |||| ||| |||| | |||||| | | ||| ||||| || || | || Sbjct 302651 TATCGTAAATACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTT 302592 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 | | | | || || | || ||||| || || | ||||||||| | ||| Sbjct 302591 GAGGCTTTGGAGTACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTAT 302539 >seq5 Length=401362 Score = 120 bits (132), Expect = 2e-22 Identities = 287/434 (66%), Gaps = 0/434 (0%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || | ||| |||||||| | ||| || |||||||| || | |||||||| Sbjct 212976 CTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTC 213035 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || || ||| ||||| | | ||| | || || || || |||| |||||||| || || Sbjct 213036 CTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAA 213095 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 | | ||||| ||| ||| || |||||||| || ||||| | |||||| | Sbjct 213096 GAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTT 213155 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169 ||||| || | ||| |||| || || ||||| ||||| || | ||| | Sbjct 213156 GTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATA 213215 Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229 || ||||| || | ||||| || ||||| ||| | ||||| || || ||||| Sbjct 213216 AGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAAT 213275 Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289 ||||| ||| | || ||| |||| |||| ||| || | ||||| | | Sbjct 213276 CATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAAT 213335 Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349 | ||||||||||| | ||| | ||| | || || | |||||||| ||| || | ||| Sbjct 213336 CAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGC 213395 Query 26350 ATGAGTATAATATC 26363 || || | |||| Sbjct 213396 GTGGGTGAAGTATC 213409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039925985800