Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq10 149 9e-31 seq12 123 4e-23 seq11 116 5e-21 seq5 114 2e-20 >seq10 Length=747934 Score = 149 bits (164), Expect = 9e-31 Identities = 372/557 (67%), Gaps = 13/557 (2%) Strand=Plus/Minus Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211 || ||||| ||||| || ||||| |||||||| |||||| | || || ||||| || Sbjct 387614 AACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAG 387555 Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271 || ||||||||||| |||||||| || || | ||| || || || ||||| | || Sbjct 387554 GTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAG 387495 Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATT 18330 ||||| | ||| || | | | ||||| || | || ||||||| | || | | | | Sbjct 387494 AAGAAAACACCTTCGATGGAGGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCG 387435 Query 18331 GCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390 || | |||||| | | |||||||| | | || || || | || || Sbjct 387434 TCT-TGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGAT 387376 Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 || || ||||| || |||| || | ||| || || || || ||||| ||||| || Sbjct 387375 GGCGTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGA 387316 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATA-AAACGATCTAGCCT 18509 || |||| ||||| ||| |||| ||||| || || |||| || |||| ||| | || Sbjct 387315 GTAGGTTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAAC--TCTTGGCT 387258 Query 18510 --CGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTC 18567 |||||| || | |||| | | || | || ||||| || || || || |||||||| Sbjct 387257 TCCGGGAT-CTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTC 387199 Query 18568 AGCAGATGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGA--- 18623 | | ||||| || || | || | || | ||||| |||| || || || | Sbjct 387198 GGAGGCGGCGAAGAAGGCAAGGAC-TCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTC 387140 Query 18624 GATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATG 18683 |||||||| |||| ||||| || || | ||| | ||| || | ||||| ||||| | Sbjct 387139 TGTTGTTCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGG 387080 Query 18684 ATTCGGCCTGTTTGTAC 18700 ||||| | |||||| Sbjct 387079 CCTCGGCACGCTTGTAC 387063 >seq12 Length=1033978 Score = 123 bits (136), Expect = 4e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 155841 ACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTG 155900 || ||||| || || || || || ||||| ||||| |||||| | || ||||| Sbjct 67273 ACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCTGACACGATCGACAACGTC 67214 Query 155901 AAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCC 155960 || || || ||||| || ||||| || |||||||| |||||||||||||||| ||| Sbjct 67213 AAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCT 67154 Query 155961 GGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAGGCGAC 156019 ||||||||| | || ||| |||||||| || || ||||| || || ||| ||| | || Sbjct 67153 GGTAAGCAGTTGGAGGATGGTAGAACTTTGTCGGACTATAACAT-TCAAAAGGAGTCCAC 67095 Query 156020 GCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || || || ||||| ||||||| || Sbjct 67094 TCTGCACTTGGTCCTAAGACTAAGAGGTGG 67065 Score = 120 bits (132), Expect = 4e-22 Identities = 168/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || | || || || || || || |||||||| | ||||| ||| | Sbjct 476168 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 476227 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | |||| || || || ||| || ||||| || ||||| || || || || Sbjct 476228 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 476287 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | ||||| ||||||||| || || || Sbjct 476288 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 476347 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| ||| | || | || || || || ||||| ||||| |||| Sbjct 476348 A--ACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGGTG 476399 >seq11 Length=632881 Score = 116 bits (128), Expect = 5e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895 |||| || |||||||| || || || || ||||||| ||| |||||| | ||| | Sbjct 600761 TTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACA 600702 Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955 | || ||| || || ||||| |||||||| || || || || |||||||||||||| | Sbjct 600701 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCT 600642 Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAG 156014 ||| |||||||| | ||||| ||||| || || || || || || || ||| || Sbjct 600641 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACAT-TCAAAAGGAA 600583 Query 156015 GCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | || | |||||||| || ||||| ||||| ||| Sbjct 600582 TCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGT 600547 >seq5 Length=401362 Score = 114 bits (126), Expect = 2e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| | ||||| |||||||| || || || || || ||||| ||| |||||| | ||| Sbjct 47461 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 47520 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 || || || || || ||||| || ||||| || ||||| || ||||||||||| Sbjct 47521 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 47580 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | ||| |||||||| | ||||| ||||| || || || || | ||||||||| Sbjct 47581 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACA--ATATCCAAA 47638 Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | |||||||| || ||||| ||||| ||| Sbjct 47639 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGT 47679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871780438400